A software platform for real-time and adaptive neuroscience experiments.

Current neuroscience research is often limited to testing predetermined hypotheses and post hoc analysis of already collected data. Adaptive experimental designs, in which modeling drives ongoing data collection and selects experimental manipulations, offer a promising alternative. However, such adaptive paradigms require tight integration between software and hardware under real-time constraints. We introduce improv, a software platform for flexible integration of modeling, data collection, analysis pipelines, and live experimental control. We demonstrate both in silico and in vivo how improv enables efficient experimental designs for discovery and validation across various model organisms and data types. We used improv to orchestrate real-time behavioral analyses, rapid functional typing of neural responses via calcium imaging, optimal visual stimulus selection, and model-driven optogenetic photostimulation of visually responsive neurons in the zebrafish brain. Together, these results demonstrate the power of improv to integrate modeling with data collection and experimental control to achieve next-generation adaptive experiments.

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Publication Details

Journal
UNC Libraries
Published
2025-11-21
DOI
https://doi.org/10.17615/b393-5r43
Primary Topic
Zebrafish Biomedical Research Applications
Type
article
Field-Weighted Citation Impact
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article

A software platform for real-time and adaptive neuroscience experiments.

Chaichontat Sriworarat, Karl Deisseroth, Maxim Nikitchenko, Matthew D. Loring et al.
UNC Libraries
Zebrafish Biomedical Research Applications
article

A software platform for real-time and adaptive neuroscience experiments.

Chaichontat Sriworarat, Karl Deisseroth, Maxim Nikitchenko, Matthew D. Loring, Eva A. Naumann, Andrea Giovannucci, Eftychios A. Pnevmatikakis, John Pearson, Anne Draelos, Daniel Sprague, Tyler Benster, Pranjal Gupta
article en

Abstract

Current neuroscience research is often limited to testing predetermined hypotheses and post hoc analysis of already collected data. Adaptive experimental designs, in which modeling drives ongoing data collection and selects experimental manipulations, offer a promising alternative. However, such adaptive paradigms require tight integration between software and hardware under real-time constraints. We introduce improv, a software platform for flexible integration of modeling, data collection, analysis pipelines, and live experimental control. We demonstrate both in silico and in vivo how improv enables efficient experimental designs for discovery and validation across various model organisms and data types. We used improv to orchestrate real-time behavioral analyses, rapid functional typing of neural responses via calcium imaging, optimal visual stimulus selection, and model-driven optogenetic photostimulation of visually responsive neurons in the zebrafish brain. Together, these results demonstrate the power of improv to integrate modeling with data collection and experimental control to achieve next-generation adaptive experiments.

UNC Libraries
University of North Carolina at Chapel Hill (US)
Openalex Percentile: Top 63%
Zebrafish Biomedical Research Applications
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