Unanticipated Reactivity toward Nucleophilic Attack in the Synthesis of Saccharyl-1,3,4-Thiadiazolyl Conjugates: Structure and Mechanistic Insights

Along with the synthetic process optimization of 3-[(5-methyl-1,3,4-thiadiazole-2-yl)sulfanyl]-1,2-benzothiazole 1,1-dioxide (MTSB), a selective copper chelator with potential interest in cancer chemotherapy, the unprecedented isolation of a novel compound, 3-(1,1-dioxidobenzo[<i>d</i>]isothiazol-3-yl)-5-methyl-1,3,4-thiadiazole-2(3<i>H</i>)-thione (BMTT), evidenced an unexpected reactivity of the starting 5-methyl-1,3,4-thiadiazole-2-thiol. To shed light into the reaction mechanisms, quantum chemical calculations were conducted at the M06-2X/def2-TZVPP/PCM(THF)//M06-2<i>X</i>/6-31++G(d,p) level of theory. The results conjecture the formation of BMTT from nucleophilic attack of the nitrogen at position 3 of the thiadiazole ring, involved in an S-to-N delocalized thiadiazole-2-thiolate structure, which is thermodynamically more favorable in the presence of Na<sup>+</sup>. Experimental assays refute a plausible concerted 1,3-sigmatropic S- to N-rearrangement of MTSB that would lead to BMTT. Hence, contradicting the nucleophilicity indices of sulfur (from thiol) and nitrogen atoms of 5-methyl-1,3,4-thiadiazole-2-thiol, it is believed that an exotic nucleophilic attack by the nitrogen at 3-position of this reagent to the sp<sup>2</sup> carbon in position 3 of pseudo-saccharyl chloride should take place. Besides, the crystal structures of the MTSB and BMTT hybrids were investigated in detail by X-ray crystallography.

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Journal
The Journal of Organic Chemistry
Published
2025-11-11
DOI
https://doi.org/10.1021/acs.joc.5c01116
Primary Topic
Click Chemistry and Applications
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article
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article

Unanticipated Reactivity toward Nucleophilic Attack in the Synthesis of Saccharyl-1,3,4-Thiadiazolyl Conjugates: Structure and Mechanistic Insights

Luís M. T. Frija, Maria L. S. Cristiano, Jaime A. S. Coelho, Bruno Guerreiro et al.
The Journal of Organic Chemistry
Click Chemistry and Applications
article

Unanticipated Reactivity toward Nucleophilic Attack in the Synthesis of Saccharyl-1,3,4-Thiadiazolyl Conjugates: Structure and Mechanistic Insights

Luís M. T. Frija, Maria L. S. Cristiano, Jaime A. S. Coelho, Bruno Guerreiro, J.A. Paixão, Débora Bachin Carvalho
article en

Abstract

Along with the synthetic process optimization of 3-[(5-methyl-1,3,4-thiadiazole-2-yl)sulfanyl]-1,2-benzothiazole 1,1-dioxide (MTSB), a selective copper chelator with potential interest in cancer chemotherapy, the unprecedented isolation of a novel compound, 3-(1,1-dioxidobenzo[<i>d</i>]isothiazol-3-yl)-5-methyl-1,3,4-thiadiazole-2(3<i>H</i>)-thione (BMTT), evidenced an unexpected reactivity of the starting 5-methyl-1,3,4-thiadiazole-2-thiol. To shed light into the reaction mechanisms, quantum chemical calculations were conducted at the M06-2X/def2-TZVPP/PCM(THF)//M06-2<i>X</i>/6-31++G(d,p) level of theory. The results conjecture the formation of BMTT from nucleophilic attack of the nitrogen at position 3 of the thiadiazole ring, involved in an S-to-N delocalized thiadiazole-2-thiolate structure, which is thermodynamically more favorable in the presence of Na<sup>+</sup>. Experimental assays refute a plausible concerted 1,3-sigmatropic S- to N-rearrangement of MTSB that would lead to BMTT. Hence, contradicting the nucleophilicity indices of sulfur (from thiol) and nitrogen atoms of 5-methyl-1,3,4-thiadiazole-2-thiol, it is believed that an exotic nucleophilic attack by the nitrogen at 3-position of this reagent to the sp<sup>2</sup> carbon in position 3 of pseudo-saccharyl chloride should take place. Besides, the crystal structures of the MTSB and BMTT hybrids were investigated in detail by X-ray crystallography.

The Journal of Organic ChemistryVol. 90(46)
Center for Inquiry (US), University of Lisbon (PT), Institut des Sciences Moléculaires (FR), University of Algarve (PT), University of Coimbra (PT)
Openalex Percentile: Top 73%
Click Chemistry and Applications
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