The Genetic Association of Single Nucleotide Polymorphisms of SERPINE1 (rs6092) and IFNAR2 (rs1051393, rs2229207) Genes Is Related to Post Covid-19 Respiratory Syndrome

<ns3:p> Background Coronavirus disease 2019 (Covid-19) is a disease of the respiratory system caused by the SARS-CoV-2 virus. The severity of Covid-19 can be affected by the presence of single nucleotide polymorphisms (SNPs) in certain genes, such as <ns3:italic>IFNAR2</ns3:italic> and <ns3:italic>SERPINE-1.</ns3:italic> This study aimed to identify and analyze the presence of SNP rs6092 in the <ns3:italic>SERPINE1</ns3:italic> gene and rs1051393 and rs2229207 in the <ns3:italic>IFNAR2</ns3:italic> gene relation in Covid-19 respiratory syndrome in Indonesia. Methods DNA was isolated from saliva samples of all patients, and a TaqMan Genotyping Assay with a real-time PCR instrument was used to run the samples. The output data were analyzed for demographic data, allele frequency, genotype frequency, and the association of all SNPs with the Covid-19 respiratory syndrome (case) and control subjects. We also analyzed blood laboratory results, blood gas analyses, coagulation factors, and inflammatory factors using SPSS. Results This study included 85 subjects comprise with Covid-19 respiratory syndrome and control subjects. Our study found no association between subjects with Covid-19 respiratory syndrome and any of the variants. However, based on the symptoms caused by rs1051393, we found that it had an effect on fever symptoms. In addition, a significant relationship between rs2229207 and chest pain symptoms was observed in patients with case group. Furthermore, our study found significant differences (p &lt; 0.05) in several blood laboratory analyses, such as the level of basophils and eGFR for rs6092 and the potassium level for rs2229207. Furthermore, arterial blood gas analysis showed that pCO2 and pH levels were significantly different for rs2229207. Conclusion Our study found an association between rs1051393 and fever and between rs2229207 and chest pain in patients with post Covid-19 respiratory syndrome. </ns3:p>

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Journal
F1000Research
Published
2025-11-21
DOI
https://doi.org/10.12688/f1000research.167074.1
Primary Topic
COVID-19 Clinical Research Studies
Type
article
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0.00

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article

The Genetic Association of Single Nucleotide Polymorphisms of SERPINE1 (rs6092) and IFNAR2 (rs1051393, rs2229207) Genes Is Related to Post Covid-19 Respiratory Syndrome

Agus Dwi Susanto, Yulia Ariani, Nadhifa Tazkia Ramadhani, Shafa Talitha Risti et al.
F1000Research
COVID-19 Clinical Research Studies
article

The Genetic Association of Single Nucleotide Polymorphisms of SERPINE1 (rs6092) and IFNAR2 (rs1051393, rs2229207) Genes Is Related to Post Covid-19 Respiratory Syndrome

Agus Dwi Susanto, Yulia Ariani, Nadhifa Tazkia Ramadhani, Shafa Talitha Risti, Indra Gunawan, Indra Muhiardi, Riyadi Sutarto
article en

Abstract

<ns3:p> Background Coronavirus disease 2019 (Covid-19) is a disease of the respiratory system caused by the SARS-CoV-2 virus. The severity of Covid-19 can be affected by the presence of single nucleotide polymorphisms (SNPs) in certain genes, such as <ns3:italic>IFNAR2</ns3:italic> and <ns3:italic>SERPINE-1.</ns3:italic> This study aimed to identify and analyze the presence of SNP rs6092 in the <ns3:italic>SERPINE1</ns3:italic> gene and rs1051393 and rs2229207 in the <ns3:italic>IFNAR2</ns3:italic> gene relation in Covid-19 respiratory syndrome in Indonesia. Methods DNA was isolated from saliva samples of all patients, and a TaqMan Genotyping Assay with a real-time PCR instrument was used to run the samples. The output data were analyzed for demographic data, allele frequency, genotype frequency, and the association of all SNPs with the Covid-19 respiratory syndrome (case) and control subjects. We also analyzed blood laboratory results, blood gas analyses, coagulation factors, and inflammatory factors using SPSS. Results This study included 85 subjects comprise with Covid-19 respiratory syndrome and control subjects. Our study found no association between subjects with Covid-19 respiratory syndrome and any of the variants. However, based on the symptoms caused by rs1051393, we found that it had an effect on fever symptoms. In addition, a significant relationship between rs2229207 and chest pain symptoms was observed in patients with case group. Furthermore, our study found significant differences (p &lt; 0.05) in several blood laboratory analyses, such as the level of basophils and eGFR for rs6092 and the potassium level for rs2229207. Furthermore, arterial blood gas analysis showed that pCO2 and pH levels were significantly different for rs2229207. Conclusion Our study found an association between rs1051393 and fever and between rs2229207 and chest pain in patients with post Covid-19 respiratory syndrome. </ns3:p>

F1000ResearchVol. 14
University of Indonesia (ID), State University of Jakarta (ID), National Brain Centre (ID)
Badan Riset dan Inovasi Nasional, Lembaga Pengelola Dana Pendidikan
Openalex Percentile: Top 58%
COVID-19 Clinical Research Studies
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