Data-driven machine learning models for predicting engineering properties in deep-sea sediments

Predicting the properties of deep-sea sediments offers critical insights into past oceanic conditions, including sediment composition, stratigraphy, and geochemical signals. However, accurate prediction is hindered by the high spatial variability of these sediments. This study presents a data-driven machine learning framework to predict five key sediment properties. Five prediction scenarios were developed with tailored preprocessing and hyperparameter tuning, and Shapley additive explanations were employed to assess feature importance and the relationships between depth and sediment properties. Among the five tested algorithms, the extreme gradient boosting (XGBoost) model achieved the highest predictive performance. Depth and compressional wave velocity emerged as the most and second most influential features for estimating porosity, grain density, calcite content, and thermal conductivity. The depth-dependent predictions with quantified uncertainties generated by the XGBoost model demonstrate that the proposed framework provides a robust approach for predicting deep-sea sediment properties.

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Publication Details

Journal
Scientific Reports
Published
2025-11-21
DOI
https://doi.org/10.1038/s41598-025-29402-7
Citations
2
Primary Topic
Methane Hydrates and Related Phenomena
Type
article
Field-Weighted Citation Impact
1.72

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article

Data-driven machine learning models for predicting engineering properties in deep-sea sediments

Jungmin Yun, Hyunwook Choo, Jongmuk Won, Junghee Park et al.
2 citations
Scientific Reports
Methane Hydrates and Related Phenomena
1.72
article

Data-driven machine learning models for predicting engineering properties in deep-sea sediments

Jungmin Yun, Hyunwook Choo, Jongmuk Won, Junghee Park, Hyung-Min Lee
article en
2 citations

Abstract

Predicting the properties of deep-sea sediments offers critical insights into past oceanic conditions, including sediment composition, stratigraphy, and geochemical signals. However, accurate prediction is hindered by the high spatial variability of these sediments. This study presents a data-driven machine learning framework to predict five key sediment properties. Five prediction scenarios were developed with tailored preprocessing and hyperparameter tuning, and Shapley additive explanations were employed to assess feature importance and the relationships between depth and sediment properties. Among the five tested algorithms, the extreme gradient boosting (XGBoost) model achieved the highest predictive performance. Depth and compressional wave velocity emerged as the most and second most influential features for estimating porosity, grain density, calcite content, and thermal conductivity. The depth-dependent predictions with quantified uncertainties generated by the XGBoost model demonstrate that the proposed framework provides a robust approach for predicting deep-sea sediment properties.

Scientific ReportsVol. 15(1)
Incheon National University (KR), Sogang University (KR), Korea University (KR), Hanyang University (KR), Ulsan National Institute of Science and Technology (KR)
National Research Foundation, National Research Foundation of Korea, Ministry of Science and ICT, South Korea
Openalex Percentile: Top 14%
Methane Hydrates and Related Phenomena
1.72
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Data-driven machine learning models for predicting engineering properties in deep-sea sediments — Jungmin Yun, Hyunwook Choo, et al. · Scientific Reports (2025) | TGRS Research Map | TGRS