The complete mitochondrial genome of the symmetrical brain coral <i>Pseudodiploria strigosa</i> (Dana, 1846) (Scleractinia: Vacatina: Faviidae)

The complete mitochondrial genome (mitogenome) of the symmetrical brain coral <i>Pseudodiploria strigosa</i> (Dana, 1846) is sequenced for the first time in this study. The newly assembled mitogenome is 16,906 bp long and encodes 13 protein coding genes (PCGs), 2 tRNA genes (trnM[cat] and trnW[tca]), and 2 ribosomal genes (rrnL and rrnS). A group I intron bisected the PCG <i>nad5</i>. The studied mitogenome also includes two relatively long non-coding regions, one 910 bp long, located between <i>cox3</i> and <i>cox2</i> and a second 799 b long, located between <i>cox1</i> and trnM(cat). Mitochondrial synteny is identical to that previously reported in cofamilial corals. The mitogenome of <i>P. strigosa</i> is AT-rich with nucleotide use as follows: <i>A</i> = 24.84%, <i>C</i> = 13.21%, <i>G</i> = 20.41%, and <i>T</i> = 41.54%. A maximum-likelihood phylomitogenomic analysis that relied on the phylogenetic signal provided by translated PCGs supported the monophyly of the family Faviidae to which <i>P. strigosa</i> belongs. This newly assembled mitochondrial genome will be employed as a reference in studies biomonitoring this and other imperiled corals in the Caribbean basin using environmental DNA.

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Publication Details

Journal
Mitochondrial DNA Part B
Published
2025-11-13
DOI
https://doi.org/10.1080/23802359.2025.2588022
Citations
1
Primary Topic
Coral and Marine Ecosystems Studies
Type
article
Field-Weighted Citation Impact
1.72
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article

The complete mitochondrial genome of the symmetrical brain coral Pseudodiploria strigosa (Dana, 1846) (Scleractinia: Vacatina: Faviidae)

Juan Antonio Baeza
1 citations
Mitochondrial DNA Part B
Coral and Marine Ecosystems Studies
1.72
article

The complete mitochondrial genome of the symmetrical brain coral Pseudodiploria strigosa (Dana, 1846) (Scleractinia: Vacatina: Faviidae)

Juan Antonio Baeza
article en
1 citations

Abstract

The complete mitochondrial genome (mitogenome) of the symmetrical brain coral <i>Pseudodiploria strigosa</i> (Dana, 1846) is sequenced for the first time in this study. The newly assembled mitogenome is 16,906 bp long and encodes 13 protein coding genes (PCGs), 2 tRNA genes (trnM[cat] and trnW[tca]), and 2 ribosomal genes (rrnL and rrnS). A group I intron bisected the PCG <i>nad5</i>. The studied mitogenome also includes two relatively long non-coding regions, one 910 bp long, located between <i>cox3</i> and <i>cox2</i> and a second 799 b long, located between <i>cox1</i> and trnM(cat). Mitochondrial synteny is identical to that previously reported in cofamilial corals. The mitogenome of <i>P. strigosa</i> is AT-rich with nucleotide use as follows: <i>A</i> = 24.84%, <i>C</i> = 13.21%, <i>G</i> = 20.41%, and <i>T</i> = 41.54%. A maximum-likelihood phylomitogenomic analysis that relied on the phylogenetic signal provided by translated PCGs supported the monophyly of the family Faviidae to which <i>P. strigosa</i> belongs. This newly assembled mitochondrial genome will be employed as a reference in studies biomonitoring this and other imperiled corals in the Caribbean basin using environmental DNA.

Mitochondrial DNA Part BVol. 10(12)
Smithsonian Institution (US), Universidad Católica del Norte (CL), Smithsonian Marine Station (US), Clemson University (US)
Openalex Percentile: Top 12%
Coral and Marine Ecosystems Studies
1.72
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The complete mitochondrial genome of the symmetrical brain coral <i>Pseudodiploria strigosa</i> (Dana, 1846) (Scleractinia: Vacatina: Faviidae) — Juan Antonio Baeza · Mitochondrial DNA Part B (2025) | TGRS Research Map | TGRS