Puribacter membranae gen. nov., sp. nov., isolated from a biofilm of a membrane bioreactor (MBR) treating sewage

Novel Gram-stain-negative, non-spore-forming, non-motile rods, designated HTMS2 and HTMS3<sup>T</sup>, were isolated from a biofilm on the membrane of a municipal sewage treatment membrane bioreactor in Nagaoka, Japan. Phylogenetic analysis of 16S rRNA genes placed them in the family <i>Burkholderiaceae</i>, most closely related to <i>Hydromonas duriensis</i> A2P5 <sup>T</sup> (94.14% similarity). Genome sequencing (2.52 Mb, 48.2% G+C) and phylogenomic analysis affiliated them with the uncultured genus lineage CTSOIL-112 in the Genome Taxonomy Database. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values to related taxa were below species thresholds (ANI ≤77.0%, dDDH ≤54.9%). In addition, average amino acid identity values to related taxa were ≤68.6%. Both strains are catalase- and oxidase-positive, reduced nitrate and utilized various carbohydrates but not <i>N</i>-acetyl-glucosamine; they differed in sorbitol assimilation. The major respiratory quinone is Q-8, and the predominant fatty acids are summed feature 3 (C_16:1 ω7c/ω6c), summed feature 8 (C_18:1 ω7c/ω6c) and C_16:0. Genomic data supported a non-motile, Gram-stain-negative phenotype. Polyphasic analysis indicates that these strains represent a novel genus and species, <i>Puribacter membranae</i> gen. nov., sp. nov. (type strain HTMS3<sup>T</sup>=NBRC 117344<sup>T</sup>=LMG 34133<sup>T</sup>).

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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2025-11-20
DOI
https://doi.org/10.1099/ijsem.0.006978
Primary Topic
Genomics and Phylogenetic Studies
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article
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article

Puribacter membranae gen. nov., sp. nov., isolated from a biofilm of a membrane bioreactor (MBR) treating sewage

Masashi Hatamoto
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
article

Puribacter membranae gen. nov., sp. nov., isolated from a biofilm of a membrane bioreactor (MBR) treating sewage

Masashi Hatamoto
article en

Abstract

Novel Gram-stain-negative, non-spore-forming, non-motile rods, designated HTMS2 and HTMS3<sup>T</sup>, were isolated from a biofilm on the membrane of a municipal sewage treatment membrane bioreactor in Nagaoka, Japan. Phylogenetic analysis of 16S rRNA genes placed them in the family <i>Burkholderiaceae</i>, most closely related to <i>Hydromonas duriensis</i> A2P5 <sup>T</sup> (94.14% similarity). Genome sequencing (2.52 Mb, 48.2% G+C) and phylogenomic analysis affiliated them with the uncultured genus lineage CTSOIL-112 in the Genome Taxonomy Database. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values to related taxa were below species thresholds (ANI ≤77.0%, dDDH ≤54.9%). In addition, average amino acid identity values to related taxa were ≤68.6%. Both strains are catalase- and oxidase-positive, reduced nitrate and utilized various carbohydrates but not <i>N</i>-acetyl-glucosamine; they differed in sorbitol assimilation. The major respiratory quinone is Q-8, and the predominant fatty acids are summed feature 3 (C_16:1 ω7c/ω6c), summed feature 8 (C_18:1 ω7c/ω6c) and C_16:0. Genomic data supported a non-motile, Gram-stain-negative phenotype. Polyphasic analysis indicates that these strains represent a novel genus and species, <i>Puribacter membranae</i> gen. nov., sp. nov. (type strain HTMS3<sup>T</sup>=NBRC 117344<sup>T</sup>=LMG 34133<sup>T</sup>).

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 75(11)
Nagaoka University of Technology (JP)
Openalex Percentile: Top 68%
Genomics and Phylogenetic Studies
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