Optimised use of passive samplers enabled early detection of SARS-CoV-2 variants BA.4 and BA.5 in sewage water
Variant profiling after whole genome sequencing. Omicron sub-lineage BA.2 was predominant (>83%). BA.4 and BA.5 were emergent variants. Rare mutations of SARS-CoV-2 detected. The same representativeness of both sampling methods.
Authors
- Marion Desdouits (ORCID: https://orcid.org/0000-0002-2625-1575)
- F. Vincent (ORCID: https://orcid.org/0000-0002-2266-9237)
- Julien Schaeffer
- Élodie Monchâtre-Leroy (ORCID: https://orcid.org/0000-0002-3231-398X)
- Françoise S. Le Guyader (ORCID: https://orcid.org/0000-0001-5821-8959)
- Sionfoungo Daouda Soro
- Virginie Lattard (ORCID: https://orcid.org/0000-0002-3371-0952)
- Mickaël Boni (ORCID: https://orcid.org/0000-0002-7331-505X)
- Marie Courbariaux
- Nicolas Cluzel (ORCID: https://orcid.org/0000-0001-7880-8913)
- Valentin Tilloy (ORCID: https://orcid.org/0000-0002-2967-8670)
- Vincent Maréchal
- El Hacene Djaout
Institutions
- Centre National de la Recherche Scientifique (FR)
- Ifremer (FR)
- Inserm (FR)
- Sorbonne Université (FR)
- VetAgro Sup (FR)
- Office National de la Chasse et de la Faune Sauvage (FR)
- Centre de Recherche Saint-Antoine (FR)
- Unité de Modélisation Mathématique et Informatique des Systèmes Complexes (FR)
- Groupement d'Intérêt Economique (FR)
- SUMMIT
- Université de Limoges (FR)
Publication Details
- Journal
- Environmental Science Water Research & Technology
- Published
- 2025-11-20
- DOI
- https://doi.org/10.1039/d5ew00482a
- Primary Topic
- SARS-CoV-2 detection and testing
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Agence Nationale de la Recherche
- Dalhousie University