Multi-pathogen respiratory surveillance in western China: Synchronized circulation patterns and predictive modeling
Respiratory pathogen dynamics in western China following COVID-19 restrictions remain poorly characterized. We analyzed 50,247 specimens across 14 pathogens from January 2020-December 2024 using multiplex PCR at Sichuan Provincial People's Hospital. Pathogen positivity is increased by 314% post-pandemic, with H1N1 showing 1,826% and <i>Mycoplasma pneumoniae</i> showing 519% increases. Human rhinovirus exhibited highest overall detection at 9.05%. Correlation analysis revealed 89% of pathogen pairs showed positive temporal associations, contrasting with typical competitive endemic patterns. School-aged children experienced disproportionate burden, with <i>M. pneumoniae</i> reaching 30.0% positivity versus 9.1% in younger children. Seasonal autoregressive integrated moving average (SARIMA) forecasting models achieved 15.2%-24.8% mean absolute percentage errors, enabling 12-month predictions. Winter months concentrated six pathogen peaks. These findings demonstrate synchronized multi-pathogen resurgence following prolonged control measures, supporting integrated surveillance approaches monitoring pathogen interactions alongside individual dynamics for enhanced epidemic preparedness.
Authors
- Yi Huang (ORCID: https://orcid.org/0000-0001-7273-8301)
- Yong Jing
- Yusong Liu (ORCID: https://orcid.org/0000-0003-4950-6304)
- Lyurong Liu
- Jiaqiang Wang (ORCID: https://orcid.org/0000-0003-0202-2046)
- Jialing Zhong
Institutions
- University of Electronic Science and Technology of China (CN)
- Fourth People's Hospital of Sichuan Province (CN)
- Sichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital (CN)
- Sichuan Provincial Hospital of Traditional Chinese Medicine (CN)
Publication Details
- Journal
- iScience
- Published
- 2025-11-20
- DOI
- https://doi.org/10.1016/j.isci.2025.114114
- Primary Topic
- Respiratory viral infections research
- Type
- article
- Field-Weighted Citation Impact
- 0.00