<i>CryoLike</i> : a Python package for cryo-electron microscopy image-to-structure likelihood calculations

Extracting conformational heterogeneity from cryo-electron microscopy (cryo-EM) images is particularly challenging for flexible biomolecules, where traditional 3D classification approaches often fail. Over the past few decades, advancements in experimental and computational techniques have been made to tackle this challenge, especially Bayesian-based approaches that provide physically interpretable insights into cryo-EM heterogeneity. To reduce the computational cost for Bayesian approaches, and building upon previously developed Fourier-Bessel image-representation methods, we created CryoLike, computationally efficient software for evaluating image-to-structure (or image-to-volume) likelihoods across large image data sets, packaged in a user-friendly Python workflow.

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Publication Details

Journal
Acta Crystallographica Section D Structural Biology
Published
2025-11-12
DOI
https://doi.org/10.1107/s2059798325009350
Primary Topic
Advanced Electron Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
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article

CryoLike : a Python package for cryo-electron microscopy image-to-structure likelihood calculations

Jeff Soules, Pilar Cossio, Aaditya V. Rangan, Wai Shing Tang
Acta Crystallographica Section D Structural Biology
Advanced Electron Microscopy Techniques and Applications
article

CryoLike : a Python package for cryo-electron microscopy image-to-structure likelihood calculations

Jeff Soules, Pilar Cossio, Aaditya V. Rangan, Wai Shing Tang
article en

Abstract

Extracting conformational heterogeneity from cryo-electron microscopy (cryo-EM) images is particularly challenging for flexible biomolecules, where traditional 3D classification approaches often fail. Over the past few decades, advancements in experimental and computational techniques have been made to tackle this challenge, especially Bayesian-based approaches that provide physically interpretable insights into cryo-EM heterogeneity. To reduce the computational cost for Bayesian approaches, and building upon previously developed Fourier-Bessel image-representation methods, we created CryoLike, computationally efficient software for evaluating image-to-structure (or image-to-volume) likelihoods across large image data sets, packaged in a user-friendly Python workflow.

Acta Crystallographica Section D Structural BiologyVol. 81(12)
Flatiron Health (United States) (US), Flatiron Institute (US)
Openalex Percentile: Top 83%
Advanced Electron Microscopy Techniques and Applications
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