Based on network pharmacology and molecular docking to explore the mechanism that Papaverine alleviates Alzheimer disease

Papaverine is a benzyl isoquinoline alkaloid extracted from poppy plant species. Unlike other poppy seed extracts, Papaverine is mainly used for smooth muscle relaxation and vascular dilation. The underlying mechanism of Papaverine in Alzheimer disease (AD) is unknown. Through the intersection of the Gene Expression Omnibus (GEO), GeneCards, and SwissTargetPrediction databases, 22 core related genes of Papaverine targeting AD were obtained. The DAVID database was applied to conduct Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses, and the Cytoscape 3.7.2 software and the String website were used for protein-protein interaction (PPI) network construction. The results showed that the main biological processes included chromatin remodeling, synaptic transmission, GABAergic, and inhibitory synapse assembly. The signaling pathways mainly included type II diabetes mellitus, nicotine addiction, and osteoclast differentiation. Molecular docking and molecular dynamics simulations exhibited that Papaverine had strong interactions with the core targets albumin (ALB), peroxisome proliferative activated receptor gamma (PPARG), and pyruvate kinase M1/2 (PKM). This study predicts the potential targets and pathways of Papaverine in the treatment of AD, providing a new research direction for elucidating its molecular mechanism and laying a theoretical foundation for clinical application.

Authors

Institutions

Publication Details

Journal
Letters in Drug Design & Discovery
Published
2025-10-01
DOI
https://doi.org/10.1016/j.lddd.2025.100170
Primary Topic
Berberine and alkaloids research
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Based on network pharmacology and molecular docking to explore the mechanism that Papaverine alleviates Alzheimer disease

Benxiang He, Yan Xu
Letters in Drug Design & Discovery
Berberine and alkaloids research
article

Based on network pharmacology and molecular docking to explore the mechanism that Papaverine alleviates Alzheimer disease

Benxiang He, Yan Xu
article en

Abstract

Papaverine is a benzyl isoquinoline alkaloid extracted from poppy plant species. Unlike other poppy seed extracts, Papaverine is mainly used for smooth muscle relaxation and vascular dilation. The underlying mechanism of Papaverine in Alzheimer disease (AD) is unknown. Through the intersection of the Gene Expression Omnibus (GEO), GeneCards, and SwissTargetPrediction databases, 22 core related genes of Papaverine targeting AD were obtained. The DAVID database was applied to conduct Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses, and the Cytoscape 3.7.2 software and the String website were used for protein-protein interaction (PPI) network construction. The results showed that the main biological processes included chromatin remodeling, synaptic transmission, GABAergic, and inhibitory synapse assembly. The signaling pathways mainly included type II diabetes mellitus, nicotine addiction, and osteoclast differentiation. Molecular docking and molecular dynamics simulations exhibited that Papaverine had strong interactions with the core targets albumin (ALB), peroxisome proliferative activated receptor gamma (PPARG), and pyruvate kinase M1/2 (PKM). This study predicts the potential targets and pathways of Papaverine in the treatment of AD, providing a new research direction for elucidating its molecular mechanism and laying a theoretical foundation for clinical application.

Letters in Drug Design & DiscoveryVol. 22(10)
Chengdu Sport University (CN)
Openalex Percentile: Top 61%
Berberine and alkaloids research
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Based on network pharmacology and molecular docking to explore the mechanism that Papaverine alleviates Alzheimer disease — Benxiang He, Yan Xu · Letters in Drug Design & Discovery (2025) | TGRS Research Map | TGRS