Open-source sub-nanometer stabilization system for super-resolution fluorescence microscopy

Recent advances in fluorescence nanoscopy have pushed resolution to the 1-10 nm range, enabling the direct visualization of individual molecules even in crowded biological environments. Achieving this level of precision requires rigorous sample drift control. Techniques such as MINFLUX and RASTMIN, which rely on keeping the sample fixed within an excitation pattern, demand active drift correction to achieve their theoretical nanometer-scale resolution limits. Here, we present an active stabilization system for super-resolution microscopy that delivers sub-nm precision for hours. Featuring a simple optical design, the system can be added as a separate module to any fluorescence microscope. We also provide an open-source control software including a user-friendly graphical interface readily adaptable to different setups. We demonstrate the adaptability and performance of the stabilization system with p-MINFLUX and RASTMIN measurements performed in two different setups, reaching the theoretical Cramér-Rao Bound and resolving ~10 nm distances within DNA origami structures.

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Publication Details

Journal
Light Science & Applications
Published
2025-11-20
DOI
https://doi.org/10.1038/s41377-025-02022-6
Primary Topic
Advanced Fluorescence Microscopy Techniques
Type
article
Field-Weighted Citation Impact
0.00

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article

Open-source sub-nanometer stabilization system for super-resolution fluorescence microscopy

Fernando D. Stefani, Andrés Zelcer, Alan M. Szalai, Guillermo P. Acuna et al.
Light Science & Applications
Advanced Fluorescence Microscopy Techniques
article

Open-source sub-nanometer stabilization system for super-resolution fluorescence microscopy

Fernando D. Stefani, Andrés Zelcer, Alan M. Szalai, Guillermo P. Acuna, Philip Tinnefeld, Piotr Zdańkowski, Giovanni Ferrari, Lucía F. Lopez, Luciano A. Masullo, Florencia Edorna, Florencia D. Choque
article en

Abstract

Recent advances in fluorescence nanoscopy have pushed resolution to the 1-10 nm range, enabling the direct visualization of individual molecules even in crowded biological environments. Achieving this level of precision requires rigorous sample drift control. Techniques such as MINFLUX and RASTMIN, which rely on keeping the sample fixed within an excitation pattern, demand active drift correction to achieve their theoretical nanometer-scale resolution limits. Here, we present an active stabilization system for super-resolution microscopy that delivers sub-nm precision for hours. Featuring a simple optical design, the system can be added as a separate module to any fluorescence microscope. We also provide an open-source control software including a user-friendly graphical interface readily adaptable to different setups. We demonstrate the adaptability and performance of the stabilization system with p-MINFLUX and RASTMIN measurements performed in two different setups, reaching the theoretical Cramér-Rao Bound and resolving ~10 nm distances within DNA origami structures.

Light Science & ApplicationsVol. 14(1)
Warsaw University of Technology (PL), Consejo Nacional de Investigaciones Científicas y Técnicas (AR), University of Fribourg (CH), Universidad de Buenos Aires (AR), Center for NanoScience (DE), Centro Científico Tecnológico - Tucumán (AR), Max Planck Institute of Biochemistry (DE), Fundación Ciencias Exactas y Naturales (AR), Ludwig-Maximilians-Universität München (DE)
National Science Foundation, Alexander von Humboldt-Stiftung, Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, Consejo Nacional de Investigaciones Científicas y Técnicas, Politechnika Warszawska, Agencia Nacional de Promoción Científica y Tecnológica
Openalex Percentile: Top 76%
Advanced Fluorescence Microscopy Techniques
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