Ish: SIMD and GPU accelerated local and semi-global alignment as a CLI filtering tool

The source code and documentation are available at https://github.com/BioRadOpenSource/ish under the Apache-2.0 License and open for community contributions. Ish is installable with Conda and supports Linux and macOS.

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Publication Details

Journal
Bioinformatics Advances
Published
2024-12-26
DOI
https://doi.org/10.1093/bioadv/vbaf292
Primary Topic
Cell Image Analysis Techniques
Type
article
Field-Weighted Citation Impact
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article

Ish: SIMD and GPU accelerated local and semi-global alignment as a CLI filtering tool

Seth Stadick
Bioinformatics Advances
Cell Image Analysis Techniques
article

Ish: SIMD and GPU accelerated local and semi-global alignment as a CLI filtering tool

Seth Stadick
article en

Abstract

The source code and documentation are available at https://github.com/BioRadOpenSource/ish under the Apache-2.0 License and open for community contributions. Ish is installable with Conda and supports Linux and macOS.

Bioinformatics AdvancesVol. 5(1)
Bio-Rad (United States) (US), Ashland (United States) (US)
Openalex Percentile: Top 83%
Cell Image Analysis Techniques
DOIOpen Access PDFOpenAlex
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Ish: SIMD and GPU accelerated local and semi-global alignment as a CLI filtering tool — Seth Stadick · Bioinformatics Advances (2024) | TGRS Research Map | TGRS