KLF5 enables dichotomous lineage programs in pancreatic cancer via the AAA+ ATPase coactivators RUVBL1 and RUVBL2
Lineage plasticity is a hallmark of pancreatic ductal adenocarcinoma (PDAC) and contributes to tumor heterogeneity and therapeutic resistance. Here, we identify KLF5 as a dynamic master regulator of epithelial lineage identity in PDAC, with dichotomous roles in promoting either classical or basal-like transcriptional programs. Through unbiased proteomic and genetic screens, we uncover the AAA+ ATPases RUVBL1 and RUVBL2 as essential coactivators of KLF5 across both lineage states. We demonstrate that ATP hydrolysis by RUVBL1/2 is required for the stable interaction with an intrinsically disordered region of KLF5, enabling its recruitment to lineage-specific enhancers and driving transcriptional regulation of identity-defining genes. Notably, small-molecule inhibitors of RUVBL1/2 ATPase activity, which have anti-PDAC activity in vivo, suppress KLF5-dependent transcription. These findings define a previously unrecognized mechanism of ATP hydrolysis-dependent transcriptional coactivation and highlight a potential therapeutic strategy for modulating aberrant lineage programs in cancer.
Authors
- Mikala Egeblad (ORCID: https://orcid.org/0000-0002-3371-1445)
- Nicole Sivetz (ORCID: https://orcid.org/0000-0002-0825-3622)
- Olaf Klingbeil (ORCID: https://orcid.org/0000-0001-7248-7506)
- Christopher R. Vakoc (ORCID: https://orcid.org/0000-0002-1158-7180)
- Diogo Maia-Silva (ORCID: https://orcid.org/0000-0003-4910-9093)
- Damianos Skopelitis (ORCID: https://orcid.org/0000-0003-4724-5462)
- Daniel Toobian
- Patrick J. Cunniff (ORCID: https://orcid.org/0000-0002-7761-6810)
Institutions
- Johns Hopkins University (US)
- Cold Spring Harbor Laboratory (US)
- Sidney Kimmel Comprehensive Cancer Center (US)
- Stony Brook University (US)
Publication Details
- Journal
- Nature Communications
- Published
- 2025-11-15
- DOI
- https://doi.org/10.1038/s41467-025-66007-0
- Citations
- 4
- Primary Topic
- Kruppel-like factors research
- Type
- article
- Field-Weighted Citation Impact
- 3.22
Funders
- Pershing Square Sohn Cancer Research Alliance
- Northwell Health
- National Cancer Institute