A Triazole Bioisostere‐Based Approach to Understanding Ceramide Amide Bond Conformation and Function

The amide bond of ceramide can adopt either a cis or trans conformation, but the biological relevance of this geometry remains unclear. We used 1,4- and 1,5-disubstituted 1,2,3-triazoles as conformationally restricted bioisosteres to investigate the functional consequences of amide bond geometry. Antiproliferative assays, sphingomyelin synthase 1 metabolite profiling, and molecular docking analyses all indicate that the trans conformation better reflects the biologically active state. These findings provide direct evidence that amide bond conformation plays a critical role in ceramide function.

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Publication Details

Journal
Chemistry - An Asian Journal
Published
2025-11-14
DOI
https://doi.org/10.1002/asia.202500925
Primary Topic
Sphingolipid Metabolism and Signaling
Type
article
Field-Weighted Citation Impact
0.00
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article

A Triazole Bioisostere‐Based Approach to Understanding Ceramide Amide Bond Conformation and Function

Seonghun Kim, Hyun Ju Yoo, Sang Kook Lee, Eun Hee Koh et al.
Chemistry - An Asian Journal
Sphingolipid Metabolism and Signaling
article

A Triazole Bioisostere‐Based Approach to Understanding Ceramide Amide Bond Conformation and Function

Seonghun Kim, Hyun Ju Yoo, Sang Kook Lee, Eun Hee Koh, Jaeho Han, Hyunji Lee, Jae Hyun Kim, Mi Jeong Kim
article en

Abstract

The amide bond of ceramide can adopt either a cis or trans conformation, but the biological relevance of this geometry remains unclear. We used 1,4- and 1,5-disubstituted 1,2,3-triazoles as conformationally restricted bioisosteres to investigate the functional consequences of amide bond geometry. Antiproliferative assays, sphingomyelin synthase 1 metabolite profiling, and molecular docking analyses all indicate that the trans conformation better reflects the biologically active state. These findings provide direct evidence that amide bond conformation plays a critical role in ceramide function.

Chemistry - An Asian JournalVol. 20(24)
Ulsan College (KR), Kyungsung University (KR), Seoul National University (KR), Asan Medical Center (KR), New Generation University College (ET), University of Ulsan (KR), Chung-Ang University (KR)
Openalex Percentile: Top 69%
Sphingolipid Metabolism and Signaling
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