Synteny plot quality control with SyntenyQC
SyntenyQC is a command line app developed using Python version 3.10 and tested using pytest. SyntenyQC is available on PyPI (https://pypi.org/project/SyntenyQC) under the MIT License, along with a detailed user tutorial. Package tests can be viewed at https://github.com/Tim-Kirkwood/SyntenyQC.
Authors
- Huimin Zhao (ORCID: https://orcid.org/0000-0002-9069-6739)
- Jack A. Connolly (ORCID: https://orcid.org/0000-0003-3643-5578)
- Ee Lui Ang (ORCID: https://orcid.org/0000-0002-3070-8056)
- Eriko Takano (ORCID: https://orcid.org/0000-0002-6791-3256)
- Rainer Breitling (ORCID: https://orcid.org/0000-0001-7173-0922)
- Tom Kirkwood (ORCID: https://orcid.org/0000-0002-6485-0608)
Institutions
- Agency for Science, Technology and Research (SG)
- University of Illinois Urbana-Champaign (US)
- National University of Singapore (SG)
- University of Manchester (GB)
- Bioinformatics Institute (SG)
- Manchester University (US)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-11-12
- DOI
- https://doi.org/10.1093/bioinformatics/btaf626
- Primary Topic
- Computational Physics and Python Applications
- Type
- article
- Field-Weighted Citation Impact
- 0.00