De Novo Design of Hexamer‐Linker Dual‐Action Nano‐PROTAC for Tumor‐Specific Ferroptosis

Proteolysis-Targeting Chimera (PROTAC) technology, a groundbreaking approach in drug discovery, leverages the ubiquitin-proteasome system to degrade disease-related proteins. Its efficacy mainly hinges on the linker design, which critically influences ternary complex (target protein-PROTAC-E3 ligase) stability and pharmacokinetics. However, optimizing linkers for diverse targets remains challenging due to complex structure-activity relationships and laborious synthesis processes. Herein, we developed a self-assembled hexamer-linker Nano-PROTACs, which was capable of self-regulating spatial distances, enabling efficient degradation of proteins with different sizes. This barrel-like hexamer-linker has a very wide range of universality, enabling the degradation of multiple size proteins (e.g., 22, 55 and 68 kDa), with a degradation efficiency of up to 99%. More importantly, compared to a linear linker, the plasma stability of this self-assembled hexamer-linker increased by 48 times. Using Nano-PROTAC with "double-gated" system combining epidermal growth factor receptor (EGFR) targeting and ROS-responsiveness, degradation of the challenging protein glutathione peroxidase 4 (GPX4) was achieved on mouse models, inducing tumor-specific ferroptosis with reduced off-target toxicity. This spatially adaptable hexamer-linker Nano-PROTAC system offers a universal strategy to streamline PROTAC development, highlighting its transformative potential for targeted protein degradation therapeutics.

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Publication Details

Journal
Angewandte Chemie International Edition
Published
2025-11-13
DOI
https://doi.org/10.1002/anie.202509924
Primary Topic
Protein Degradation and Inhibitors
Type
article
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article

De Novo Design of Hexamer‐Linker Dual‐Action Nano‐PROTAC for Tumor‐Specific Ferroptosis

Xia Yu, Hao‐Ze Li, Ni‐Yuan Zhang, M. S. Cai et al.
Angewandte Chemie International Edition
Protein Degradation and Inhibitors
article

De Novo Design of Hexamer‐Linker Dual‐Action Nano‐PROTAC for Tumor‐Specific Ferroptosis

Xia Yu, Hao‐Ze Li, Ni‐Yuan Zhang, M. S. Cai, Hao Wang, Yixuan Liu, Hong‐Wei An, Kai Zhou, Zhuan Wen, Shang Wei Wu
article en

Abstract

Proteolysis-Targeting Chimera (PROTAC) technology, a groundbreaking approach in drug discovery, leverages the ubiquitin-proteasome system to degrade disease-related proteins. Its efficacy mainly hinges on the linker design, which critically influences ternary complex (target protein-PROTAC-E3 ligase) stability and pharmacokinetics. However, optimizing linkers for diverse targets remains challenging due to complex structure-activity relationships and laborious synthesis processes. Herein, we developed a self-assembled hexamer-linker Nano-PROTACs, which was capable of self-regulating spatial distances, enabling efficient degradation of proteins with different sizes. This barrel-like hexamer-linker has a very wide range of universality, enabling the degradation of multiple size proteins (e.g., 22, 55 and 68 kDa), with a degradation efficiency of up to 99%. More importantly, compared to a linear linker, the plasma stability of this self-assembled hexamer-linker increased by 48 times. Using Nano-PROTAC with "double-gated" system combining epidermal growth factor receptor (EGFR) targeting and ROS-responsiveness, degradation of the challenging protein glutathione peroxidase 4 (GPX4) was achieved on mouse models, inducing tumor-specific ferroptosis with reduced off-target toxicity. This spatially adaptable hexamer-linker Nano-PROTAC system offers a universal strategy to streamline PROTAC development, highlighting its transformative potential for targeted protein degradation therapeutics.

Angewandte Chemie International EditionVol. 65(2)
Shenyang Pharmaceutical University (CN), Fudan University (CN), Henan University of Technology (CN), Zhengzhou University (CN), National Center for Nanoscience and Technology (CN), University of Chinese Academy of Sciences (CN), Tsinghua University (CN)
Openalex Percentile: Top 70%
Protein Degradation and Inhibitors
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