Description of Albimonas marina sp. nov., isolated from sea sand on the Yellow Sea Coast

A Gram-stain-negative, anaerobic, short rod-shaped bacterium, designated as CAU 1670<sup>T</sup>, was isolated from a sea sand sample collected from Masiran Beach, Republic of Korea. Optimal growth conditions for the bacterium were identified as growth media containing 0-3% (w/v) NaCl at 30 °C and pH 5.5. Strain CAU 1670<sup>T</sup> exhibited high 16S rRNA gene sequence similarity with Albimonas pacifica CGMCC 1.11030<sup>T</sup> (97.8% similarity) and Albimonas donghaensis DSM 17,890<sup>T</sup> (94.8% similarity). The phylogeny tree based on the 16 S rRNA gene and core housekeeping gene sequences showed that strain CAU 1670<sup>T</sup> belonged to the genus Albimonas. The major fatty acids included summed feature 8 (C<sub>18:1</sub> ω7c and/or C<sub>18:1</sub> ω6c), and the predominant respiratory quinone was Q-10. The G + C content of the type strain genome was 72.6%. The average nucleotide identity and digital DNA-DNA hybridization values between strain CAU 1670<sup>T</sup> and reference strains were 78.5-86.4% and 22.1-31.0%, respectively. Pan-genome analysis demonstrated that strain CAU 1670<sup>T</sup> and reference strains shared 2,010 core genes. Based on phenotypic, phylogenetic, and chemotaxonomic characteristics, strain CAU 1670<sup>T</sup> represents a novel species within the genus Albimonas, for which the name Albimonas marina sp. nov. is proposed. The type strain is CAU 1670<sup>T</sup> (= KCTC 92734<sup>T</sup>; = MCCC 1K08481<sup>T</sup>).

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Journal
Current Microbiology
Published
2025-11-13
DOI
https://doi.org/10.1007/s00284-025-04587-2
Primary Topic
Genomics and Phylogenetic Studies
Type
article
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article

Description of Albimonas marina sp. nov., isolated from sea sand on the Yellow Sea Coast

Hyunwoo Jung, Wonyong Kim, Y. Kim, Ampaitip Sukhoom et al.
Current Microbiology
Genomics and Phylogenetic Studies
article

Description of Albimonas marina sp. nov., isolated from sea sand on the Yellow Sea Coast

Hyunwoo Jung, Wonyong Kim, Y. Kim, Ampaitip Sukhoom, Jung‐Hoon Yoon, Jung‐Sook Lee, Eun‐Seo Cho
article en

Abstract

A Gram-stain-negative, anaerobic, short rod-shaped bacterium, designated as CAU 1670<sup>T</sup>, was isolated from a sea sand sample collected from Masiran Beach, Republic of Korea. Optimal growth conditions for the bacterium were identified as growth media containing 0-3% (w/v) NaCl at 30 °C and pH 5.5. Strain CAU 1670<sup>T</sup> exhibited high 16S rRNA gene sequence similarity with Albimonas pacifica CGMCC 1.11030<sup>T</sup> (97.8% similarity) and Albimonas donghaensis DSM 17,890<sup>T</sup> (94.8% similarity). The phylogeny tree based on the 16 S rRNA gene and core housekeeping gene sequences showed that strain CAU 1670<sup>T</sup> belonged to the genus Albimonas. The major fatty acids included summed feature 8 (C<sub>18:1</sub> ω7c and/or C<sub>18:1</sub> ω6c), and the predominant respiratory quinone was Q-10. The G + C content of the type strain genome was 72.6%. The average nucleotide identity and digital DNA-DNA hybridization values between strain CAU 1670<sup>T</sup> and reference strains were 78.5-86.4% and 22.1-31.0%, respectively. Pan-genome analysis demonstrated that strain CAU 1670<sup>T</sup> and reference strains shared 2,010 core genes. Based on phenotypic, phylogenetic, and chemotaxonomic characteristics, strain CAU 1670<sup>T</sup> represents a novel species within the genus Albimonas, for which the name Albimonas marina sp. nov. is proposed. The type strain is CAU 1670<sup>T</sup> (= KCTC 92734<sup>T</sup>; = MCCC 1K08481<sup>T</sup>).

Current MicrobiologyVol. 83(1)
Prince of Songkla University (TH), Lux Research (United States) (US), Chung-Ang University (KR), Korea Research Institute of Bioscience and Biotechnology (KR), Sungkyunkwan University (KR)
Universität Konstanz
Openalex Percentile: Top 70%
Genomics and Phylogenetic Studies
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