On artificial crystal structure generation for solving the phase problem with deep learning

We discuss and present approaches for generating artificial crystal structures for training neural networks to solve the phase problem. Structure generation is considered as a two-step process involving sampling unit-cell parameters and filling the unit cell with atoms. The former step includes generating lattice basis vectors from randomly sampled unit-cell volume. Apart from randomly placing atoms, we use database data to guide fast and scalable generation of molecule-like fragments. The recently developed neural network PhAI is then used as a benchmark and retrained with various sets of training data to assess how the corresponding models perform on experimental crystal structure data. We found a significant improvement in PhAI retrained on a new kind of artificial data to generalize the phase problem solution for larger unit-cell structures.

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Publication Details

Journal
Acta Crystallographica Section A Foundations and Advances
Published
2025-11-11
DOI
https://doi.org/10.1107/s2053273325009428
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.00

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article

On artificial crystal structure generation for solving the phase problem with deep learning

Toms Rekis, Džonatans Miks Melgalvis
Acta Crystallographica Section A Foundations and Advances
Machine Learning in Materials Science
article

On artificial crystal structure generation for solving the phase problem with deep learning

Toms Rekis, Džonatans Miks Melgalvis
article en

Abstract

We discuss and present approaches for generating artificial crystal structures for training neural networks to solve the phase problem. Structure generation is considered as a two-step process involving sampling unit-cell parameters and filling the unit cell with atoms. The former step includes generating lattice basis vectors from randomly sampled unit-cell volume. Apart from randomly placing atoms, we use database data to guide fast and scalable generation of molecule-like fragments. The recently developed neural network PhAI is then used as a benchmark and retrained with various sets of training data to assess how the corresponding models perform on experimental crystal structure data. We found a significant improvement in PhAI retrained on a new kind of artificial data to generalize the phase problem solution for larger unit-cell structures.

Acta Crystallographica Section A Foundations and AdvancesVol. 82(1)
Goethe University Frankfurt (DE), University of Latvia (LV)
Latvijas Zinātnes Padome, Latvijas Universitate, Latvijas Universitātes Fonds
Openalex Percentile: Top 73%
Machine Learning in Materials Science
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