fish2eod: finite element modelling of active electric sensing

Understanding the neural basis of animal behaviour requires a thorough description of the associated sensory inputs. This is especially important when behaviour actively shapes incoming sensory information. Weakly electric fish use perturbations in a self-generated electric field as a basis for an electric sense, and these field perturbations are encoded by electroreceptors distributed over their bodies. Thus, swimming movements and body pose shape not only the field but also the orientation of the receptor array. Previous modelling in this context has focused primarily on the so-called electric image in stationary fish and has not addressed how natural electrosensory inputs are generated in freely swimming fish. Here, we present fish2eod, an open-source finite-element-based modelling framework that describes the dynamics of electrosensory inputs during natural behaviours, including social interactions, in complex environments.

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Publication Details

Journal
Journal of Experimental Biology
Published
2025-11-11
DOI
https://doi.org/10.1242/jeb.251003
Primary Topic
Fish biology, ecology, and behavior
Type
article
Field-Weighted Citation Impact
0.00

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article

fish2eod: finite element modelling of active electric sensing

Mary Upshall, John E. Lewis, Aaron R. Shifman
Journal of Experimental Biology
Fish biology, ecology, and behavior
article

fish2eod: finite element modelling of active electric sensing

Mary Upshall, John E. Lewis, Aaron R. Shifman
article en

Abstract

Understanding the neural basis of animal behaviour requires a thorough description of the associated sensory inputs. This is especially important when behaviour actively shapes incoming sensory information. Weakly electric fish use perturbations in a self-generated electric field as a basis for an electric sense, and these field perturbations are encoded by electroreceptors distributed over their bodies. Thus, swimming movements and body pose shape not only the field but also the orientation of the receptor array. Previous modelling in this context has focused primarily on the so-called electric image in stationary fish and has not addressed how natural electrosensory inputs are generated in freely swimming fish. Here, we present fish2eod, an open-source finite-element-based modelling framework that describes the dynamics of electrosensory inputs during natural behaviours, including social interactions, in complex environments.

Journal of Experimental BiologyVol. 229(1)
University of Ottawa (CA), Ottawa University (US)
Government of Ontario, Natural Sciences and Engineering Research Council of Canada
Openalex Percentile: Top 67%
Fish biology, ecology, and behavior
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