Network stress: a wiring diagram of whole stress genes

Stress sensitivity and tolerance are the consequences of coordinated regulation by multiple genes. Existing genetic tools can identify key genes that mediate metabolic and physiological processes sensing and perceiving stresses. However, it has become increasingly clear that the end-point phenotype of stress response resulting from these intermediate processes involves intricate but well-coordinated networks constituted by a large array of genes. Here, we describe an emerging functional game-graph theory to coalesce all genes from mapping or association studies into genetic interaction networks. These networks enable geneticists to trace, visualize, and interrogate the precise roadmap of how each gene acts and interacts with every other gene to mediate stress response. By shifting reductionist thinking to a holistic, systems-oriented thinking, this theory overcomes a major challenge of elucidating the detailed genetic architecture of stress response.

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Publication Details

Journal
Horticulture Research
Published
2025-10-29
DOI
https://doi.org/10.1093/hr/uhaf302
Primary Topic
Bioinformatics and Genomic Networks
Type
article
Field-Weighted Citation Impact
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article

Network stress: a wiring diagram of whole stress genes

Rongling Wu, Yu Wang
Horticulture Research
Bioinformatics and Genomic Networks
article

Network stress: a wiring diagram of whole stress genes

Rongling Wu, Yu Wang
article en

Abstract

Stress sensitivity and tolerance are the consequences of coordinated regulation by multiple genes. Existing genetic tools can identify key genes that mediate metabolic and physiological processes sensing and perceiving stresses. However, it has become increasingly clear that the end-point phenotype of stress response resulting from these intermediate processes involves intricate but well-coordinated networks constituted by a large array of genes. Here, we describe an emerging functional game-graph theory to coalesce all genes from mapping or association studies into genetic interaction networks. These networks enable geneticists to trace, visualize, and interrogate the precise roadmap of how each gene acts and interacts with every other gene to mediate stress response. By shifting reductionist thinking to a holistic, systems-oriented thinking, this theory overcomes a major challenge of elucidating the detailed genetic architecture of stress response.

Horticulture ResearchVol. 13(2)
Shanghai Institute for Science of Science (CN), Institute of Applied Mathematics and Mechanics (UA), Research Applications (United States) (US), Tsinghua University (CN)
Openalex Percentile: Top 70%
Bioinformatics and Genomic Networks
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Network stress: a wiring diagram of whole stress genes — Rongling Wu, Yu Wang · Horticulture Research (2025) | TGRS Research Map | TGRS