S1157 Unsupervised Clustering of Functional Gastrointestinal Disorders in NHANES Reveals Novel Mood–Diet–Symptom Phenotypes by Race and Sex

Introduction: Functional gastrointestinal (GI) disorders like irritable bowel syndrome (IBS) are heterogeneous, yet existing subtypes fail to capture the complex interplay of diet, psychology, and behavior. We applied unsupervised machine learning to identify data-driven GI phenotypes based on lifestyle and psychological features and assessed their distribution across sex and race. Methods: We analyzed data from adults in the 2017–2018 NHANES cycle with complete information on bowel symptoms, pain, depression, dietary intake (fat, fiber, sugar), sleep, and physical activity. Bowel symptoms were assessed using the Bowel Health Questionnaire, while depression was measured with the Patient Health Questionnaire-9 (PHQ-9). Dietary intake was evaluated via 2 24-hour dietary recalls conducted by trained interviewers using the United States Department of Agriculture’s (USDA) Automated Multiple-Pass Method; reported foods were linked to nutrient values through the USDA Food and Nutrient Database for Dietary Studies. Sleep was self-reported via validated questionnaire, and physical activity was captured using the Physical Activity Questionnaire. All features were standardized and subjected to K-means clustering. Trait and demographic patterns were visualized using heatmaps and principal component analysis. Results: Among 1,965 adults, four distinct clusters emerged. The elbow plot suggested diminishing returns beyond K = 4, while the silhouette plot peaked at K = 2 but remained stable at K = 4, supporting a balance of separation and granularity. Cluster 1 (n = 530) was predominantly male and younger, with low symptom burden despite high-fat/sugar intake. Cluster 2 (n = 290) was predominantly women, with highest PHQ-9 and pain scores, low fiber intake, and poor sleep, with the highest proportion of Non-Hispanic Black participants (29%). Cluster 3 (n = 1,141) had moderate symptoms and healthier behaviors. Heatmaps revealed distinct psychological-dietary profiles by cluster, highlighting underappreciated heterogeneity in symptom expression across race and sex. Cluster 4 (n = 4) was excluded from final comparisons. Conclusion: Unsupervised clustering revealed novel functional GI phenotypes that integrate psychological and lifestyle traits, offering a more comprehensive framework than current classifications. These clusters varied significantly by sex and race, underscoring the need for more inclusive diagnostic criteria and targeted interventions. Future studies should validate these findings in clinical cohorts and explore their utility in guiding personalized care.

Authors

Publication Details

Journal
The American Journal of Gastroenterology
Published
2025-10-01
DOI
https://doi.org/10.14309/01.ajg.0001132088.90130.ea
Primary Topic
Gastrointestinal motility and disorders
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

S1157 Unsupervised Clustering of Functional Gastrointestinal Disorders in NHANES Reveals Novel Mood–Diet–Symptom Phenotypes by Race and Sex

Nanditha Venkatesan, Paarth Kapadia, Varun Jain, Shruthi Sethuraman et al.
The American Journal of Gastroenterology
Gastrointestinal motility and disorders
article

S1157 Unsupervised Clustering of Functional Gastrointestinal Disorders in NHANES Reveals Novel Mood–Diet–Symptom Phenotypes by Race and Sex

Nanditha Venkatesan, Paarth Kapadia, Varun Jain, Shruthi Sethuraman, Antonio La Torre, Nikita Garg, Justin-James Chua, Tushar Abhinav
article en

Abstract

Introduction: Functional gastrointestinal (GI) disorders like irritable bowel syndrome (IBS) are heterogeneous, yet existing subtypes fail to capture the complex interplay of diet, psychology, and behavior. We applied unsupervised machine learning to identify data-driven GI phenotypes based on lifestyle and psychological features and assessed their distribution across sex and race. Methods: We analyzed data from adults in the 2017–2018 NHANES cycle with complete information on bowel symptoms, pain, depression, dietary intake (fat, fiber, sugar), sleep, and physical activity. Bowel symptoms were assessed using the Bowel Health Questionnaire, while depression was measured with the Patient Health Questionnaire-9 (PHQ-9). Dietary intake was evaluated via 2 24-hour dietary recalls conducted by trained interviewers using the United States Department of Agriculture’s (USDA) Automated Multiple-Pass Method; reported foods were linked to nutrient values through the USDA Food and Nutrient Database for Dietary Studies. Sleep was self-reported via validated questionnaire, and physical activity was captured using the Physical Activity Questionnaire. All features were standardized and subjected to K-means clustering. Trait and demographic patterns were visualized using heatmaps and principal component analysis. Results: Among 1,965 adults, four distinct clusters emerged. The elbow plot suggested diminishing returns beyond K = 4, while the silhouette plot peaked at K = 2 but remained stable at K = 4, supporting a balance of separation and granularity. Cluster 1 (n = 530) was predominantly male and younger, with low symptom burden despite high-fat/sugar intake. Cluster 2 (n = 290) was predominantly women, with highest PHQ-9 and pain scores, low fiber intake, and poor sleep, with the highest proportion of Non-Hispanic Black participants (29%). Cluster 3 (n = 1,141) had moderate symptoms and healthier behaviors. Heatmaps revealed distinct psychological-dietary profiles by cluster, highlighting underappreciated heterogeneity in symptom expression across race and sex. Cluster 4 (n = 4) was excluded from final comparisons. Conclusion: Unsupervised clustering revealed novel functional GI phenotypes that integrate psychological and lifestyle traits, offering a more comprehensive framework than current classifications. These clusters varied significantly by sex and race, underscoring the need for more inclusive diagnostic criteria and targeted interventions. Future studies should validate these findings in clinical cohorts and explore their utility in guiding personalized care.

The American Journal of GastroenterologyVol. 120(10S2)
Openalex Percentile: Top 53%
Gastrointestinal motility and disorders
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.