Structural modeling and biochemical characterization of MSMEG_0748, a MoxR ATPase from Mycobacterium smegmatis

<i>Mycobacterium tuberculosis</i> persists in a latent state within host macrophages by adapting to hostile conditions such as hypoxia and oxidative stress. Central to this adaptation, the carbon monoxide dehydrogenase (CO-DH) gene cluster supports intracellular survival by metabolizing carbon monoxide and nitric oxide. Among the uncharacterized genes within this cluster<i>, msmeg_0748</i>, annotated as a MoxR-type AAA+ ATPase in <i>Mycobacterium smegmatis</i> MC<sup>2</sup> 155, is hypothesized to act as a chaperone in CO-DH maturation. To characterize this protein, we employed AlphaFold3 structure prediction, validated by sequence alignment, SEC-MALS, biochemical assays, and biophysical analyses. MSMEG_0748 was confirmed to form a characteristic hexameric structure in solution. The structural models displayed conserved features including Walker A and B motifs and the MoxR-ATPase specific Helix 2 Insert (H2I). Furthermore, ATP/NADH- enzyme coupled assays confirmed its intrinsic ATP hydrolysis activity, which was dependent on the conserved catalytic glutamate (E146) in the Walker B motif. Co-immunoprecipitation experiments subsequently demonstrated a direct interaction between MSMEG_0748 and the adjacent VWA domain-containing protein, MSMEG_0751. These results provide comprehensive structural and functional insights into MSMEG_0748 and suggest the MSMEG_0748-MSMEG_0751 complex functions as the MoxR-VWA chaperone system essential for metalloenzyme maturation in mycobacteria.

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Journal
Computational and Structural Biotechnology Journal
Published
2025-01-01
DOI
https://doi.org/10.1016/j.csbj.2025.11.010
Primary Topic
Heme Oxygenase-1 and Carbon Monoxide
Type
article
Field-Weighted Citation Impact
0.00

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article

Structural modeling and biochemical characterization of MSMEG_0748, a MoxR ATPase from Mycobacterium smegmatis

Hyo Guk Kim, Hyun‐A Seong, Ju Eun Lee, Hyo Je Cho et al.
Computational and Structural Biotechnology Journal
Heme Oxygenase-1 and Carbon Monoxide
article

Structural modeling and biochemical characterization of MSMEG_0748, a MoxR ATPase from Mycobacterium smegmatis

Hyo Guk Kim, Hyun‐A Seong, Ju Eun Lee, Hyo Je Cho, Minkyung Cho, Sang‐Min Jang, So Yeon Lee
article en

Abstract

<i>Mycobacterium tuberculosis</i> persists in a latent state within host macrophages by adapting to hostile conditions such as hypoxia and oxidative stress. Central to this adaptation, the carbon monoxide dehydrogenase (CO-DH) gene cluster supports intracellular survival by metabolizing carbon monoxide and nitric oxide. Among the uncharacterized genes within this cluster<i>, msmeg_0748</i>, annotated as a MoxR-type AAA+ ATPase in <i>Mycobacterium smegmatis</i> MC<sup>2</sup> 155, is hypothesized to act as a chaperone in CO-DH maturation. To characterize this protein, we employed AlphaFold3 structure prediction, validated by sequence alignment, SEC-MALS, biochemical assays, and biophysical analyses. MSMEG_0748 was confirmed to form a characteristic hexameric structure in solution. The structural models displayed conserved features including Walker A and B motifs and the MoxR-ATPase specific Helix 2 Insert (H2I). Furthermore, ATP/NADH- enzyme coupled assays confirmed its intrinsic ATP hydrolysis activity, which was dependent on the conserved catalytic glutamate (E146) in the Walker B motif. Co-immunoprecipitation experiments subsequently demonstrated a direct interaction between MSMEG_0748 and the adjacent VWA domain-containing protein, MSMEG_0751. These results provide comprehensive structural and functional insights into MSMEG_0748 and suggest the MSMEG_0748-MSMEG_0751 complex functions as the MoxR-VWA chaperone system essential for metalloenzyme maturation in mycobacteria.

Computational and Structural Biotechnology JournalVol. 27
Chungbuk National University (KR)
National Research Foundation, Chungbuk National University, National Research Foundation of Korea, Ministry of Science and ICT, South Korea
Openalex Percentile: Top 70%
Heme Oxygenase-1 and Carbon Monoxide
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