Genome-wide identification and expression analysis of the PYL gene family in response to salt, drought and cold stresses in Solanum melongena L.

This study presents the first genome-wide identification of 24 Sm-PYL genes in eggplant, classified into three subfamilies. Structural and evolutionary analyses revealed conserved motifs, purifying selection, and gene family expansion through duplication. Comparative genomics with tomato, potato and pepper identified 86 syntenic pairs, highlighting evolutionary conservation. Promoter analysis uncovered stress- and hormone-related cis-elements, while expression profiling linked specific Sm-PYLs to salt/drought (Sm-PYL1/12/14/15/23) and cold (Sm-PYL7/9/10/13/16/23/24) responses. These findings enhance understanding of ABA-mediated stress tolerance in eggplant and provide a basis for future functional studies to improve abiotic stress resilience.

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Publication Details

Journal
BMC Genomics
Published
2025-11-06
DOI
https://doi.org/10.1186/s12864-025-12249-7
Citations
1
Primary Topic
Plant Stress Responses and Tolerance
Type
article
Field-Weighted Citation Impact
1.75
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article

Genome-wide identification and expression analysis of the PYL gene family in response to salt, drought and cold stresses in Solanum melongena L.

Genyun Liang, Yanhong Lan, Duchen Liu, Xia Feng et al.
1 citations
BMC Genomics
Plant Stress Responses and Tolerance
1.75
article

Genome-wide identification and expression analysis of the PYL gene family in response to salt, drought and cold stresses in Solanum melongena L.

Genyun Liang, Yanhong Lan, Duchen Liu, Xia Feng, Chao Fang, Fangyi Gong, Xiaojun Liu, Yifan Li, Chun Li, Peng Cai, Tian Zhang
article en
1 citations

Abstract

This study presents the first genome-wide identification of 24 Sm-PYL genes in eggplant, classified into three subfamilies. Structural and evolutionary analyses revealed conserved motifs, purifying selection, and gene family expansion through duplication. Comparative genomics with tomato, potato and pepper identified 86 syntenic pairs, highlighting evolutionary conservation. Promoter analysis uncovered stress- and hormone-related cis-elements, while expression profiling linked specific Sm-PYLs to salt/drought (Sm-PYL1/12/14/15/23) and cold (Sm-PYL7/9/10/13/16/23/24) responses. These findings enhance understanding of ABA-mediated stress tolerance in eggplant and provide a basis for future functional studies to improve abiotic stress resilience.

BMC GenomicsVol. 26(1)
Ministry of Agriculture (EE), Ministry of Agriculture (ID), Science and Technology Department of Sichuan Province (CN), Sichuan Academy of Agricultural Sciences (CN)
Openalex Percentile: Top 11%
Plant Stress Responses and Tolerance
1.75
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Genome-wide identification and expression analysis of the PYL gene family in response to salt, drought and cold stresses in Solanum melongena L. — Genyun Liang, Yanhong Lan, et al. · BMC Genomics (2025) | TGRS Research Map | TGRS