Canonical and Rare Tautomers of Nucleobases and Their Taggants in the Gas Phase: A Benchmark Computational Study

We present a comprehensive benchmark of canonical and rare nucleobase tautomers in the gas phase with equilibrium geometries and relative stabilities determined at spectroscopic accuracy. Explicitly correlated composite schemes, including core-valence contributions and complete basis set extrapolation, reproduce experimental data for stable forms and reliably predict structural and energetic features of rare species. A reduced-cost strategy, based on one-parameter bond corrections to geometries optimized with a double-hybrid functional, is validated as an accurate route for larger systems. This benchmark catalogue provides a reference for nucleobase tautomerism and a scalable foundation for systematic studies of nucleic acid fragments.

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Publication Details

Journal
The Journal of Physical Chemistry A
Published
2025-11-06
DOI
https://doi.org/10.1021/acs.jpca.5c07251
Primary Topic
DNA and Nucleic Acid Chemistry
Type
article
Field-Weighted Citation Impact
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article

Canonical and Rare Tautomers of Nucleobases and Their Taggants in the Gas Phase: A Benchmark Computational Study

Luigi Crisci, Federico Lazzari, Marco Mendolicchio, Lisa B. Fiore et al.
The Journal of Physical Chemistry A
DNA and Nucleic Acid Chemistry
article

Canonical and Rare Tautomers of Nucleobases and Their Taggants in the Gas Phase: A Benchmark Computational Study

Luigi Crisci, Federico Lazzari, Marco Mendolicchio, Lisa B. Fiore, Vincenzo Barone
article en

Abstract

We present a comprehensive benchmark of canonical and rare nucleobase tautomers in the gas phase with equilibrium geometries and relative stabilities determined at spectroscopic accuracy. Explicitly correlated composite schemes, including core-valence contributions and complete basis set extrapolation, reproduce experimental data for stable forms and reliably predict structural and energetic features of rare species. A reduced-cost strategy, based on one-parameter bond corrections to geometries optimized with a double-hybrid functional, is validated as an accurate route for larger systems. This benchmark catalogue provides a reference for nucleobase tautomerism and a scalable foundation for systematic studies of nucleic acid fragments.

The Journal of Physical Chemistry AVol. 129(46)
University of Pisa (IT), Scuola Normale Superiore (IT), Scuola Superiore Meridionale (IT), National Interuniversity Consortium of Materials Science and Technology (IT)
Openalex Percentile: Top 71%
DNA and Nucleic Acid Chemistry
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