Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’

Metagenomes and metatranscriptomes were generated from the surface mixed layer and hypolimnion at a NOAA-Great Lakes Environmental Research Laboratory Real-Time Coastal Observation Network (ReCON) site in Lake Erie's central basin during the onset of hypolimnetic hypoxia. Here, we describe the sequencing of the samples, metagenome assembly, and binning of microbial taxa.

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Publication Details

Journal
Microbiology Resource Announcements
Published
2025-11-05
DOI
https://doi.org/10.1128/mra.01013-25
Primary Topic
Microbial Community Ecology and Physiology
Type
article
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article

Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’

Gaston E. Small, Katelyn M. Brown, R. Michael L. McKay, Robert W. Sterner et al.
Microbiology Resource Announcements
Microbial Community Ecology and Physiology
article

Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’

Gaston E. Small, Katelyn M. Brown, R. Michael L. McKay, Robert W. Sterner, Jacques C. Finlay, George S. Bullerjahn, Benjamin F. N. Beall, Tijana Glavina del Rio
article en

Abstract

Metagenomes and metatranscriptomes were generated from the surface mixed layer and hypolimnion at a NOAA-Great Lakes Environmental Research Laboratory Real-Time Coastal Observation Network (ReCON) site in Lake Erie's central basin during the onset of hypolimnetic hypoxia. Here, we describe the sequencing of the samples, metagenome assembly, and binning of microbial taxa.

Microbiology Resource AnnouncementsVol. 14(12)
University of Minnesota (US), Bowling Green State University (US), University of St. Thomas - Minnesota (US), Joint Genome Institute (US), University of Minnesota, Duluth (US), University of Windsor (CA), Great Lakes Institute of Management (IN), Thomas University (US)
Openalex Percentile: Top 68%
Microbial Community Ecology and Physiology
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Depth-resolved paired metagenomes and metatranscriptomes from the Lake Erie ‘dead zone’ — Gaston E. Small, Katelyn M. Brown, et al. · Microbiology Resource Announcements (2025) | TGRS Research Map | TGRS