Bioinformatics insights into TMPO-AS1–let-7b-5p–ESPL1/E2F8 regulatory axis in breast cancer

We found that <i>ESPL1</i> gene was significantly overexpressed in tumors, metastatic tissues, and circulating tumor cells, with tumor samples showing an overall 4-fold increase in expression compared to adjacent normal tissue of BC patients. Furthermore, BC patients with high <i>ESPL1</i> expression exhibited shorter overall survival (OS), disease-free survival (DFS), and relapse-free survival (RFS) compared to patients with low expression. Tumors from ER-negative and PR-negative BC patients exhibited elevated expression levels of both <i>ESPL1</i> and the transcription factor <i>E2F8</i>. Moreover, increased levels of <i>ESPL1</i> and <i>E2F8</i> were positively correlated with lncRNA <i>TMPO-AS1</i>, while negatively correlated with <i>hsa-let-7b-5p</i>. Notably, the 3' untranslated region (3'UTR) of <i>ESPL1</i> showed strong binding sites for <i>hsa-let-7b-5p</i>. We also identified Hesperidin as a high affinity <i>ESPL1</i> binders, suggesting novel therapeutic candidates targeting this oncogenic network.

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Journal
Frontiers in Cell and Developmental Biology
Published
2025-11-05
DOI
https://doi.org/10.3389/fcell.2025.1635862
Primary Topic
Protein Kinase Regulation and GTPase Signaling
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article
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article

Bioinformatics insights into TMPO-AS1–let-7b-5p–ESPL1/E2F8 regulatory axis in breast cancer

Rajeev Nema, Pallavi Kulkarni, Jaya Thilakan, Swagata Brahmachari et al.
Frontiers in Cell and Developmental Biology
Protein Kinase Regulation and GTPase Signaling
article

Bioinformatics insights into TMPO-AS1–let-7b-5p–ESPL1/E2F8 regulatory axis in breast cancer

Rajeev Nema, Pallavi Kulkarni, Jaya Thilakan, Swagata Brahmachari, Neha Arya, Aditi Singh, Ashok Kumar, Sudhir K. Goel, Camille Saini, Prerna Vats, Bhavika Baweja
article en

Abstract

We found that <i>ESPL1</i> gene was significantly overexpressed in tumors, metastatic tissues, and circulating tumor cells, with tumor samples showing an overall 4-fold increase in expression compared to adjacent normal tissue of BC patients. Furthermore, BC patients with high <i>ESPL1</i> expression exhibited shorter overall survival (OS), disease-free survival (DFS), and relapse-free survival (RFS) compared to patients with low expression. Tumors from ER-negative and PR-negative BC patients exhibited elevated expression levels of both <i>ESPL1</i> and the transcription factor <i>E2F8</i>. Moreover, increased levels of <i>ESPL1</i> and <i>E2F8</i> were positively correlated with lncRNA <i>TMPO-AS1</i>, while negatively correlated with <i>hsa-let-7b-5p</i>. Notably, the 3' untranslated region (3'UTR) of <i>ESPL1</i> showed strong binding sites for <i>hsa-let-7b-5p</i>. We also identified Hesperidin as a high affinity <i>ESPL1</i> binders, suggesting novel therapeutic candidates targeting this oncogenic network.

Frontiers in Cell and Developmental BiologyVol. 13
All India Institute of Medical Sciences Bhopal (IN), Manipal University Jaipur
Openalex Percentile: Top 71%
Protein Kinase Regulation and GTPase Signaling
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Bioinformatics insights into TMPO-AS1–let-7b-5p–ESPL1/E2F8 regulatory axis in breast cancer — Rajeev Nema, Pallavi Kulkarni, et al. · Frontiers in Cell and Developmental Biology (2025) | TGRS Research Map | TGRS