A dual-validation 3D nnU-Net framework with harmonized preprocessing for robust DLBCL segamentation in PET/CT images

Diffuse large B-cell lymphoma (DLBCL) is an aggressive and common subtype of non-Hodgkin lymphoma. The automatic segmentation of DLBCL tumors from positron emission tomography/computed tomography (PET/CT) images remains a significant challenge due to the complexity and variable appearance of tumors. In this study, we developed and evaluated a 3D nn-UNet model for the automatic segmentation of DLBCL lesions to support treatment planning and monitoring. The model was trained on 18F-FDG PET/CT scans from 217 patients. Performance was assessed using geometric metrics, resulting in a mean Dice Similarity Coefficient (DSC) of 0.85, Intersection over Union (IoU) of 0.75, sensitivity of 88.3 %, specificity of 95.7 %, and accuracy of 97.1 %. To establish clinical validity, the Total Metabolic Tumor Volume (TMTV) was derived from both ground truth and predicted segmentations. Bland-Altman analysis demonstrated strong agreement, and linear regression confirmed a high correlation between the volumes. The key novelty of our work lies in a harmonized preprocessing pipeline and a dual-validation strategy that integrates geometric metrics (DSC, IoU) with volumetric and metabolic assessments (TMTV, Standardized Uptake Value (SUVmax)). The results, supported by box plots illustrating metric distributions, confirm the model's robustness, reliability, and potential for clinical utility in managing DLBCL.

Authors

Institutions

Publication Details

Journal
Machine Learning with Applications
Published
2025-11-05
DOI
https://doi.org/10.1016/j.mlwa.2025.100788
Citations
1
Primary Topic
Medical Imaging Techniques and Applications
Type
article
Field-Weighted Citation Impact
1.36
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A dual-validation 3D nnU-Net framework with harmonized preprocessing for robust DLBCL segamentation in PET/CT images

Dariush Sardari, Sajad Keshavarz, Hossein Arabi, Elham Saeedzadeh et al.
1 citations
Machine Learning with Applications
Medical Imaging Techniques and Applications
1.36
article

A dual-validation 3D nnU-Net framework with harmonized preprocessing for robust DLBCL segamentation in PET/CT images

Dariush Sardari, Sajad Keshavarz, Hossein Arabi, Elham Saeedzadeh, Elnaz Jenabi-Haghparast
article en
1 citations

Abstract

Diffuse large B-cell lymphoma (DLBCL) is an aggressive and common subtype of non-Hodgkin lymphoma. The automatic segmentation of DLBCL tumors from positron emission tomography/computed tomography (PET/CT) images remains a significant challenge due to the complexity and variable appearance of tumors. In this study, we developed and evaluated a 3D nn-UNet model for the automatic segmentation of DLBCL lesions to support treatment planning and monitoring. The model was trained on 18F-FDG PET/CT scans from 217 patients. Performance was assessed using geometric metrics, resulting in a mean Dice Similarity Coefficient (DSC) of 0.85, Intersection over Union (IoU) of 0.75, sensitivity of 88.3 %, specificity of 95.7 %, and accuracy of 97.1 %. To establish clinical validity, the Total Metabolic Tumor Volume (TMTV) was derived from both ground truth and predicted segmentations. Bland-Altman analysis demonstrated strong agreement, and linear regression confirmed a high correlation between the volumes. The key novelty of our work lies in a harmonized preprocessing pipeline and a dual-validation strategy that integrates geometric metrics (DSC, IoU) with volumetric and metabolic assessments (TMTV, Standardized Uptake Value (SUVmax)). The results, supported by box plots illustrating metric distributions, confirm the model's robustness, reliability, and potential for clinical utility in managing DLBCL.

Machine Learning with ApplicationsVol. 22
Islamic Azad University Medical Branch of Tehran (IR), University Hospital of Geneva (CH), SickKids Foundation (CA)
Openalex Percentile: Top 14%
Medical Imaging Techniques and Applications
1.36
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

A dual-validation 3D nnU-Net framework with harmonized preprocessing for robust DLBCL segamentation in PET/CT images — Dariush Sardari, Sajad Keshavarz, et al. · Machine Learning with Applications (2025) | TGRS Research Map | TGRS