An Ocean of Opsins

In this study, we explored the diversity and evolution of opsins using meta-omic data from the Tara Oceans and Tara Polar Circle expeditions, one of the largest marine datasets available. By using sequence similarity methods and phylogenetic analyses, we identified opsins across the different metazoan groups. Our results indicate that most of the opsin sequences belong to arthropods and vertebrates. We also detected sequences from all known opsin subfamilies, including r-opsin, c-opsin, xenopsin, and Group-4 opsins. Despite the broad taxonomic scope, no new opsin families were discovered; however, we provide valuable taxonomic insights into known opsin subfamilies and reinforce existing phylogenetic hypotheses. Additionally, we present novel opsin sequences from less-studied taxa, such as chaetognaths, rotifers, acoelomates, and tunicates, and which may serve as a valuable resource for future research into opsin function and diversity.

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Publication Details

Journal
Genome Biology and Evolution
Published
2025-10-08
DOI
https://doi.org/10.1093/gbe/evaf189
Primary Topic
Neurobiology and Insect Physiology Research
Type
article
Field-Weighted Citation Impact
0.00

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article

An Ocean of Opsins

Roberto Feuda, Salvatore D’Aniello, Giacinto De Vivo, Éric Pelletier
Genome Biology and Evolution
Neurobiology and Insect Physiology Research
article

An Ocean of Opsins

Roberto Feuda, Salvatore D’Aniello, Giacinto De Vivo, Éric Pelletier
article en

Abstract

In this study, we explored the diversity and evolution of opsins using meta-omic data from the Tara Oceans and Tara Polar Circle expeditions, one of the largest marine datasets available. By using sequence similarity methods and phylogenetic analyses, we identified opsins across the different metazoan groups. Our results indicate that most of the opsin sequences belong to arthropods and vertebrates. We also detected sequences from all known opsin subfamilies, including r-opsin, c-opsin, xenopsin, and Group-4 opsins. Despite the broad taxonomic scope, no new opsin families were discovered; however, we provide valuable taxonomic insights into known opsin subfamilies and reinforce existing phylogenetic hypotheses. Additionally, we present novel opsin sequences from less-studied taxa, such as chaetognaths, rotifers, acoelomates, and tunicates, and which may serve as a valuable resource for future research into opsin function and diversity.

Genome Biology and EvolutionVol. 17(11)
Centre National de la Recherche Scientifique (FR), University of Leicester (GB), Commissariat à l'Énergie Atomique et aux Énergies Alternatives (FR), Université Paris-Saclay (FR), Stazione Zoologica Anton Dohrn (IT), GNA University (IN), Ecologie & Evolution (FR), Genoscope (FR), CEA Paris-Saclay (FR), University of Bologna (IT)
Stazione Zoologica Anton Dohrn
Openalex Percentile: Top 65%
Neurobiology and Insect Physiology Research
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An Ocean of Opsins — Roberto Feuda, Salvatore D’Aniello, et al. · Genome Biology and Evolution (2025) | TGRS Research Map | TGRS