Using N and O isotope fractionation for evaluating denitrification in aquatic systems

The increasing prevalence of nitrate contamination in surface waters, groundwater, and ocean waters, represents a critical environmental challenge, particularly in regions with intensive agriculture and aquaculture. Denitrification, the microbial reduction of nitrate to dinitrogen gas, plays a pivotal role in mitigating this contamination and regulating the global nitrogen cycle. Stable isotope analysis provides critical insights into nitrate transformation pathways, distinguishing denitrification from anaerobic ammonium oxidation (anammox), another N-loss process, or internal recycling processes such as dissimilatory nitrate reduction to ammonium (DNRA). This review highlights the importance of isotopic tools for assessing nitrate attenuation in natural and anthropogenic-impacted systems and explores the use of nitrogen (δ 15 N) and oxygen (δ 18 O) isotopic fractionation to trace denitrification and to quantify its extent in diverse aquatic environments. The nitrogen (N) and oxygen (O) isotopic fractionation during denitrification is evaluated at organism and ecosystem levels. Also, environmental factors modulating isotopic composition of N compounds in groundwater, rivers, lakes, riparian zones, coastal wetlands and oxygen-deficient marine regions are explored. Advances in isotope biogeochemistry and analytical techniques improve our ability to assess the transport and fate of nitrate, integrating isotopic data with hydrological and biogeochemical models. A precise characterization of N and O isotopic enrichment factors for denitrification supports improved predictions of nitrogen cycling dynamics under changing environmental conditions. These approaches enhance understanding of nitrogen removal processes and help refine estimates of nitrogen fluxes at local, regional and global scales. By providing a quantitative framework for evaluating denitrification and related processes, this review contributes to developing more effective strategies for managing nitrogen pollution and mitigating its impacts on aquatic ecosystems. HIGHLIGHTS • Application of δ 15 N and δ 18 O analyses to trace denitrification in aquatic systems. • Evaluation of nitrate transformation pathways and their isotopic effects with an emphasis on denitrification. • Insights into microbial and enzymatic controls on nitrogen and oxygen isotope fractionation during denitrification. • Assessment of environmental factors modulating isotopic enrichment in denitrification across continental and marine ecosystems. • Implications of nitrate isotopic fractionation for distinguishing denitrification from other nitrogen cycling processes and managing anthropogenic nitrogen inputs.

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Journal
TrAC Trends in Analytical Chemistry
Published
2025-11-04
DOI
https://doi.org/10.1016/j.trac.2025.118527
Primary Topic
Soil and Water Nutrient Dynamics
Type
article
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article

Using N and O isotope fractionation for evaluating denitrification in aquatic systems

Mathieu Sébilo, Mark A. Altabet, Rosanna Margalef-Martí, Bernhard Mayer et al.
TrAC Trends in Analytical Chemistry
Soil and Water Nutrient Dynamics
article

Using N and O isotope fractionation for evaluating denitrification in aquatic systems

Mathieu Sébilo, Mark A. Altabet, Rosanna Margalef-Martí, Bernhard Mayer, Kay Knöller, Annie Bourbonnais
article en

Abstract

The increasing prevalence of nitrate contamination in surface waters, groundwater, and ocean waters, represents a critical environmental challenge, particularly in regions with intensive agriculture and aquaculture. Denitrification, the microbial reduction of nitrate to dinitrogen gas, plays a pivotal role in mitigating this contamination and regulating the global nitrogen cycle. Stable isotope analysis provides critical insights into nitrate transformation pathways, distinguishing denitrification from anaerobic ammonium oxidation (anammox), another N-loss process, or internal recycling processes such as dissimilatory nitrate reduction to ammonium (DNRA). This review highlights the importance of isotopic tools for assessing nitrate attenuation in natural and anthropogenic-impacted systems and explores the use of nitrogen (δ 15 N) and oxygen (δ 18 O) isotopic fractionation to trace denitrification and to quantify its extent in diverse aquatic environments. The nitrogen (N) and oxygen (O) isotopic fractionation during denitrification is evaluated at organism and ecosystem levels. Also, environmental factors modulating isotopic composition of N compounds in groundwater, rivers, lakes, riparian zones, coastal wetlands and oxygen-deficient marine regions are explored. Advances in isotope biogeochemistry and analytical techniques improve our ability to assess the transport and fate of nitrate, integrating isotopic data with hydrological and biogeochemical models. A precise characterization of N and O isotopic enrichment factors for denitrification supports improved predictions of nitrogen cycling dynamics under changing environmental conditions. These approaches enhance understanding of nitrogen removal processes and help refine estimates of nitrogen fluxes at local, regional and global scales. By providing a quantitative framework for evaluating denitrification and related processes, this review contributes to developing more effective strategies for managing nitrogen pollution and mitigating its impacts on aquatic ecosystems. HIGHLIGHTS • Application of δ 15 N and δ 18 O analyses to trace denitrification in aquatic systems. • Evaluation of nitrate transformation pathways and their isotopic effects with an emphasis on denitrification. • Insights into microbial and enzymatic controls on nitrogen and oxygen isotope fractionation during denitrification. • Assessment of environmental factors modulating isotopic enrichment in denitrification across continental and marine ecosystems. • Implications of nitrate isotopic fractionation for distinguishing denitrification from other nitrogen cycling processes and managing anthropogenic nitrogen inputs.

TrAC Trends in Analytical ChemistryVol. 194
University of Massachusetts Dartmouth (US), Centre National de la Recherche Scientifique (FR), Helmholtz Centre for Environmental Research (DE), University of South Carolina (US), University of Calgary (CA), Université Paris-Est Créteil (FR), Alberta Energy (CA), Technische Universität Darmstadt (DE), Sorbonne Université (FR), Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR), Institut d'écologie et des sciences de l'environnement de Paris (FR), Institut de Recherche pour le Développement (FR), Universitat de Barcelona (ES)
Openalex Percentile: Top 72%
Soil and Water Nutrient Dynamics
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