Dual Embedding: A Fine-Tuned Language Model Approach for Accurate Polymer Glass Transition Temperature Prediction

Recent years have witnessed major advances in polymer informatics, yet accurately predicting polymer properties, such as the glass transition temperature (<i>T</i><sub>g</sub>), remains a challenge. Language models like BERT have been leveraged to derive embeddings from polymer representations (e.g., SMILES). However, similarity between embedding vectors in these latent spaces primarily reflects chemical structural similarity, with limited alignment to physicochemical properties. Here, we introduce a dual-embedding framework that enhances <i>T</i><sub>g</sub> prediction by combining a conventional BERT-based embedding with a fine-tuned counterpart explicitly trained so that vector similarity reflects proximity in <i>T</i><sub>g</sub> values. We evaluate our approach across four benchmarks: a heterogeneous data set compared against 25 machine learning baselines, along with three additional data sets focused on homopolymers and polyimides. The dual embedding outperforms standard BERT-based embeddings, achieving up to a 20% reduction in RMSE and surpassing alternative models such as graph-based and descriptor-based approaches. These results demonstrate that embedding molecular properties directly into representations can advance polymer informatics beyond structure-centric paradigms.

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Publication Details

Journal
Journal of Chemical Information and Modeling
Published
2025-11-04
DOI
https://doi.org/10.1021/acs.jcim.5c02469
Citations
1
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
0.52
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article

Dual Embedding: A Fine-Tuned Language Model Approach for Accurate Polymer Glass Transition Temperature Prediction

Sébastien Pruvost, Jannick Duchet‐Rumeau, Jean-Marc Petit, Aymar Tchagoue et al.
1 citations
Journal of Chemical Information and Modeling
Machine Learning in Materials Science
0.52
article

Dual Embedding: A Fine-Tuned Language Model Approach for Accurate Polymer Glass Transition Temperature Prediction

Sébastien Pruvost, Jannick Duchet‐Rumeau, Jean-Marc Petit, Aymar Tchagoue, Jean‐François Gérard, Véronique Églin
article en
1 citations

Abstract

Recent years have witnessed major advances in polymer informatics, yet accurately predicting polymer properties, such as the glass transition temperature (<i>T</i><sub>g</sub>), remains a challenge. Language models like BERT have been leveraged to derive embeddings from polymer representations (e.g., SMILES). However, similarity between embedding vectors in these latent spaces primarily reflects chemical structural similarity, with limited alignment to physicochemical properties. Here, we introduce a dual-embedding framework that enhances <i>T</i><sub>g</sub> prediction by combining a conventional BERT-based embedding with a fine-tuned counterpart explicitly trained so that vector similarity reflects proximity in <i>T</i><sub>g</sub> values. We evaluate our approach across four benchmarks: a heterogeneous data set compared against 25 machine learning baselines, along with three additional data sets focused on homopolymers and polyimides. The dual embedding outperforms standard BERT-based embeddings, achieving up to a 20% reduction in RMSE and surpassing alternative models such as graph-based and descriptor-based approaches. These results demonstrate that embedding molecular properties directly into representations can advance polymer informatics beyond structure-centric paradigms.

Journal of Chemical Information and ModelingVol. 65(22)
Université Claude Bernard Lyon 1 (FR), Centre National de la Recherche Scientifique (FR), Laboratoire d'Informatique en Images et Systèmes d'Information (FR), Institut National des Sciences Appliquées de Lyon (FR), Université Jean Monnet (FR)
Openalex Percentile: Top 31%
Machine Learning in Materials Science
0.52
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