Prognostic model construction and mechanism analysis of ribosome biogenesis-related genes in gastric cancer based on WGCNA and machine learning methods

Ribosome biogenesis (RB) is crucial for cell proliferation, but the role of RB-related genes (RBRGs) in gastric cancer remains unclear. Using TCGA and GEO data, we identified differentially expressed RBRGs and constructed a robust 7-gene prognostic model. High-risk patients exhibited activated oncogenic pathways, suppressed cell cycle/DNA repair, enriched M2 macrophages and Tregs, and increased sensitivity to various antitumor drugs. This RBRG-based model effectively predicts gastric cancer prognosis and reveals subtype-specific biological and immune characteristics.

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Publication Details

Journal
Computer Methods in Biomechanics & Biomedical Engineering
Published
2025-11-03
DOI
https://doi.org/10.1080/10255842.2025.2579786
Primary Topic
Ferroptosis and cancer prognosis
Type
article
Field-Weighted Citation Impact
0.00
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article

Prognostic model construction and mechanism analysis of ribosome biogenesis-related genes in gastric cancer based on WGCNA and machine learning methods

Ling Zhang, Xiao Li, Feng Yan
Computer Methods in Biomechanics & Biomedical Engineering
Ferroptosis and cancer prognosis
article

Prognostic model construction and mechanism analysis of ribosome biogenesis-related genes in gastric cancer based on WGCNA and machine learning methods

Ling Zhang, Xiao Li, Feng Yan
article en

Abstract

Ribosome biogenesis (RB) is crucial for cell proliferation, but the role of RB-related genes (RBRGs) in gastric cancer remains unclear. Using TCGA and GEO data, we identified differentially expressed RBRGs and constructed a robust 7-gene prognostic model. High-risk patients exhibited activated oncogenic pathways, suppressed cell cycle/DNA repair, enriched M2 macrophages and Tregs, and increased sensitivity to various antitumor drugs. This RBRG-based model effectively predicts gastric cancer prognosis and reveals subtype-specific biological and immune characteristics.

Computer Methods in Biomechanics & Biomedical Engineering
Wuhan No.1 Hospital (CN), Wuhan No.9 Hospital (CN)
Openalex Percentile: Top 54%
Ferroptosis and cancer prognosis
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