Modulation of Inositol 1,4,5-Trisphosphate Receptors by Their Primary Physiological Ligands, IP <sub>3</sub> , Ca <sup>2+</sup> , and ATP

Inositol 1,4,5-trisphosphate (IP<sub>3</sub>) receptors (IP<sub>3</sub>Rs) are ubiquitously expressed intracellular calcium (Ca<sup>2+</sup>) release channels predominantly localized to the endoplasmic reticulum. There are three IP<sub>3</sub>R subtypes, which assemble as homo-/heterotetramers. The opening of IP<sub>3</sub>Rs requires binding of one IP<sub>3</sub> per monomer and Ca<sup>2+</sup> Recent high-resolution cryogenic electron microscopy (cryo-EM) structures of IP<sub>3</sub>Rs in combination with functional assays have greatly increased our understanding of the structural basis for IP<sub>3</sub>R channel opening and closing. IP<sub>3</sub>R channel activation is facilitated by IP<sub>3</sub> and Ca<sup>2+</sup> binding to the activation site. Channel inactivation occurs in the presence of IP<sub>3</sub> and high Ca<sup>2+</sup> when Ca<sup>2+</sup> is bound to the low-affinity Ca<sup>2+</sup>-binding motif. Specifically, in the near atomic resolution structures of IP<sub>3</sub>Rs, densities corresponding to the primary agonists-IP<sub>3</sub> and Ca<sup>2+</sup>-and the allosteric modulator adenosine triphosphate (ATP) were identified. In this article, we aim to provide a comprehensive overview of the current understanding of structure-function relationships for IP<sub>3</sub>Rs mediated by IP<sub>3</sub>, Ca<sup>2+</sup>, and ATP.

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Journal
Cold Spring Harbor Perspectives in Biology
Published
2025-11-03
DOI
https://doi.org/10.1101/cshperspect.a041762
Citations
1
Primary Topic
Protein Kinase Regulation and GTPase Signaling
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article
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article

Modulation of Inositol 1,4,5-Trisphosphate Receptors by Their Primary Physiological Ligands, IP 3 , Ca 2+ , and ATP

David I. Yule, Vikas Arige, Irina I. Serysheva, David M. MacLean et al.
1 citations
Cold Spring Harbor Perspectives in Biology
Protein Kinase Regulation and GTPase Signaling
article

Modulation of Inositol 1,4,5-Trisphosphate Receptors by Their Primary Physiological Ligands, IP 3 , Ca 2+ , and ATP

David I. Yule, Vikas Arige, Irina I. Serysheva, David M. MacLean, Xiao-Xuan Lin
article en
1 citations

Abstract

Inositol 1,4,5-trisphosphate (IP<sub>3</sub>) receptors (IP<sub>3</sub>Rs) are ubiquitously expressed intracellular calcium (Ca<sup>2+</sup>) release channels predominantly localized to the endoplasmic reticulum. There are three IP<sub>3</sub>R subtypes, which assemble as homo-/heterotetramers. The opening of IP<sub>3</sub>Rs requires binding of one IP<sub>3</sub> per monomer and Ca<sup>2+</sup> Recent high-resolution cryogenic electron microscopy (cryo-EM) structures of IP<sub>3</sub>Rs in combination with functional assays have greatly increased our understanding of the structural basis for IP<sub>3</sub>R channel opening and closing. IP<sub>3</sub>R channel activation is facilitated by IP<sub>3</sub> and Ca<sup>2+</sup> binding to the activation site. Channel inactivation occurs in the presence of IP<sub>3</sub> and high Ca<sup>2+</sup> when Ca<sup>2+</sup> is bound to the low-affinity Ca<sup>2+</sup>-binding motif. Specifically, in the near atomic resolution structures of IP<sub>3</sub>Rs, densities corresponding to the primary agonists-IP<sub>3</sub> and Ca<sup>2+</sup>-and the allosteric modulator adenosine triphosphate (ATP) were identified. In this article, we aim to provide a comprehensive overview of the current understanding of structure-function relationships for IP<sub>3</sub>Rs mediated by IP<sub>3</sub>, Ca<sup>2+</sup>, and ATP.

Cold Spring Harbor Perspectives in Biology
University of Rochester Medical Center (US), The University of Texas Health Science Center (US), University of Rochester (US), The University of Texas Health Science Center at Houston (US)
Protein Kinase Regulation and GTPase Signaling
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Modulation of Inositol 1,4,5-Trisphosphate Receptors by Their Primary Physiological Ligands, IP <sub>3</sub> , Ca <sup>2+</sup> , and ATP — David I. Yule, Vikas Arige, et al. · Cold Spring Harbor Perspectives in Biology (2025) | TGRS Research Map | TGRS