Design and Synthesis of Polyamine‐Proteolysis Targeting Chimera Conjugates for Histone Deacetylase (HDAC) Degradation with Enhanced Cellular Uptake

Although histone deacetylase (HDAC) inhibitors have demonstrated significant advantages in the field of targeted cancer therapy, numerous adverse events have been observed due to the high doses required to achieve therapeutic effects. Additionally, acquired drug resistance to HDAC inhibitors has also been observed in clinical usage. Given these findings, the development of HDAC degraders may represent a more promising strategy to overcome these limitations due to their specific mechanism of action. In this study, 14 HDAC degraders featuring a polyamine linker are designed and synthesized by conjugating HDAC inhibitors (HDACi, Vorinostat) with Cereblon (CRBN, an E3 ubiquitin ligase ligand). Significantly, compound I exhibited a degradation efficiency of ≈62% at 5 μM in MDA-MB-231 cells. Additionally, compound N exhibited the highest cellular uptake efficiency in a dose- and time-dependent manner. The findings presented in our manuscript provided valuable insights for the development of a proteolysis targeting chimera with high cellular uptake efficiency.

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Journal
ChemistryOpen
Published
2025-11-02
DOI
https://doi.org/10.1002/open.202500356
Primary Topic
Histone Deacetylase Inhibitors Research
Type
article
Field-Weighted Citation Impact
0.00

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article

Design and Synthesis of Polyamine‐Proteolysis Targeting Chimera Conjugates for Histone Deacetylase (HDAC) Degradation with Enhanced Cellular Uptake

Wentian Chen, Xianming Zeng, Wenting Du, Yanran Liu et al.
ChemistryOpen
Histone Deacetylase Inhibitors Research
article

Design and Synthesis of Polyamine‐Proteolysis Targeting Chimera Conjugates for Histone Deacetylase (HDAC) Degradation with Enhanced Cellular Uptake

Wentian Chen, Xianming Zeng, Wenting Du, Yanran Liu, Jun Li, Yanwei Shang, Chaonan Tang
article en

Abstract

Although histone deacetylase (HDAC) inhibitors have demonstrated significant advantages in the field of targeted cancer therapy, numerous adverse events have been observed due to the high doses required to achieve therapeutic effects. Additionally, acquired drug resistance to HDAC inhibitors has also been observed in clinical usage. Given these findings, the development of HDAC degraders may represent a more promising strategy to overcome these limitations due to their specific mechanism of action. In this study, 14 HDAC degraders featuring a polyamine linker are designed and synthesized by conjugating HDAC inhibitors (HDACi, Vorinostat) with Cereblon (CRBN, an E3 ubiquitin ligase ligand). Significantly, compound I exhibited a degradation efficiency of ≈62% at 5 μM in MDA-MB-231 cells. Additionally, compound N exhibited the highest cellular uptake efficiency in a dose- and time-dependent manner. The findings presented in our manuscript provided valuable insights for the development of a proteolysis targeting chimera with high cellular uptake efficiency.

ChemistryOpen
Hangzhou Medical College (CN)
National Science and Technology Major Project, Natural Science Foundation of Zhejiang Province
Openalex Percentile: Top 71%
Histone Deacetylase Inhibitors Research
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