Deazapurine Amide-Bond Synthetases: a New Family of Amide-Bond-Forming Enzymes Driving the Diversity of Peptidyl Deazapurine Natural Products

Amide bond-forming enzymes play a crucial role in generating structural diversity in natural products by assembling them from relatively simple precursors. Two distinct types of standalone amid-bond-forming enzymes are commonly involved in natural product biosynthesis, including ATP-grasp enzymes and amide bond synthetases. Here, we report a new family of amide bond synthetases that catalyze amide bond formation between deazapurine as the sole carboxylic acid substrate and various amine substrates, which we have designated as deazapurine amide bond synthetases (DABS). This evolutionarily related enzyme family plays a central role in diversifying the structures of peptidyl deazapurine natural products. Our gene mining analysis reveals that most DABS-associated biosynthetic gene clusters (BGCs) remain cryptic. Therefore, systematic characterization of these cryptic BGCs holds great potential for discovering novel peptidyl deazapurine natural products with diverse biological activities.

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Publication Details

Journal
Journal of the American Chemical Society
Published
2025-11-02
DOI
https://doi.org/10.1021/jacs.5c13285
Primary Topic
Microbial Natural Products and Biosynthesis
Type
article
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article

Deazapurine Amide-Bond Synthetases: a New Family of Amide-Bond-Forming Enzymes Driving the Diversity of Peptidyl Deazapurine Natural Products

Dong‐Chan Oh, Junyong Kim, Chang-Hun Ji, C.‐K. KIM et al.
Journal of the American Chemical Society
Microbial Natural Products and Biosynthesis
article

Deazapurine Amide-Bond Synthetases: a New Family of Amide-Bond-Forming Enzymes Driving the Diversity of Peptidyl Deazapurine Natural Products

Dong‐Chan Oh, Junyong Kim, Chang-Hun Ji, C.‐K. KIM, Hahk‐Soo Kang, Belokon YuN, Sangwook Kang
article en

Abstract

Amide bond-forming enzymes play a crucial role in generating structural diversity in natural products by assembling them from relatively simple precursors. Two distinct types of standalone amid-bond-forming enzymes are commonly involved in natural product biosynthesis, including ATP-grasp enzymes and amide bond synthetases. Here, we report a new family of amide bond synthetases that catalyze amide bond formation between deazapurine as the sole carboxylic acid substrate and various amine substrates, which we have designated as deazapurine amide bond synthetases (DABS). This evolutionarily related enzyme family plays a central role in diversifying the structures of peptidyl deazapurine natural products. Our gene mining analysis reveals that most DABS-associated biosynthetic gene clusters (BGCs) remain cryptic. Therefore, systematic characterization of these cryptic BGCs holds great potential for discovering novel peptidyl deazapurine natural products with diverse biological activities.

Journal of the American Chemical SocietyVol. 147(45)
Seoul National University (KR), Konkuk University (KR), Konkuk University Medical Center (KR), Ono Pharmaceutical (United States) (US)
Openalex Percentile: Top 64%
Microbial Natural Products and Biosynthesis
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Deazapurine Amide-Bond Synthetases: a New Family of Amide-Bond-Forming Enzymes Driving the Diversity of Peptidyl Deazapurine Natural Products — Dong‐Chan Oh, Junyong Kim, et al. · Journal of the American Chemical Society (2025) | TGRS Research Map | TGRS