The Big BIT maize experiment: A large multi‐location, multi‐year, multi‐tester, multi‐population predictive breeding validation study

The Big Breeding Innovation Team (Big BIT) maize (Zea mays L.) experiment was one of the largest genomic data-informed predictive breeding validation studies ever conducted. The experiment was a multi-location, multi-year, multi-tester, multi-population study involving F1 maize hybrids created by crossing individual doubled haploids to inbred testers. The purpose of the study, performed by DuPont Pioneer/Corteva Agriscience in 2017, 2018, and 2019, was to build comprehensive datasets to help answer a wide range of practical questions focused on optimizing predictive breeding strategies in maize. The purpose of our study is to (1) describe the design and unique features of our study and (2) discuss learnings with practical implications for plant breeders. Since the same F1 maize hybrids were grown across three distinct years, we use basic descriptive summary statistics to discuss our learnings. We provide a technical justification for the use of basic statistics and discuss the expected theoretical prediction accuracy of genomic estimated breeding values (GEBVs) of Big BIT individuals and families, and predictive abilities obtained by performing large-scale cross-validations. Our study provides multi-year field data-based evidence that, for inbred/variety development focused plant improvement efforts, early-stage genetic evaluation should be based on GEBVs generated from wide-area testing training datasets. This holds true for candidates for selection with or without own phenotypic records.

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Publication Details

Journal
The Plant Genome
Published
2025-10-31
DOI
https://doi.org/10.1002/tpg2.70117
Citations
1
Primary Topic
Genetic and phenotypic traits in livestock
Type
article
Field-Weighted Citation Impact
1.82
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article

The Big BIT maize experiment: A large multi‐location, multi‐year, multi‐tester, multi‐population predictive breeding validation study

Amy Jacobson, Christine Diepenbrock, John Arbuckle, Matthew D. Caldwell et al.
1 citations
The Plant Genome
Genetic and phenotypic traits in livestock
1.82
article

The Big BIT maize experiment: A large multi‐location, multi‐year, multi‐tester, multi‐population predictive breeding validation study

Amy Jacobson, Christine Diepenbrock, John Arbuckle, Matthew D. Caldwell, Liviu R. Totir, Deanne Wright, R. W. McDowell, Andrew Baumgarten, Andrew Ross, Haytham Helmi, L Caroline Stirling, Andres A. Reyes, L. Spangler, Sandra Cristina Kothe Milach, Hsiao‐Yi Hung, Mark Cooper, Carla Gho, Carlos D. Messina, Tom Tang, Dean Podlich, Geoff Graham, Michael J. Chandler, Matthew Smalley, Michael Jines, Honghua Zhao, Gary Henke, Jared Gogerty, Matthew Regennitter
article en
1 citations

Abstract

The Big Breeding Innovation Team (Big BIT) maize (Zea mays L.) experiment was one of the largest genomic data-informed predictive breeding validation studies ever conducted. The experiment was a multi-location, multi-year, multi-tester, multi-population study involving F1 maize hybrids created by crossing individual doubled haploids to inbred testers. The purpose of the study, performed by DuPont Pioneer/Corteva Agriscience in 2017, 2018, and 2019, was to build comprehensive datasets to help answer a wide range of practical questions focused on optimizing predictive breeding strategies in maize. The purpose of our study is to (1) describe the design and unique features of our study and (2) discuss learnings with practical implications for plant breeders. Since the same F1 maize hybrids were grown across three distinct years, we use basic descriptive summary statistics to discuss our learnings. We provide a technical justification for the use of basic statistics and discuss the expected theoretical prediction accuracy of genomic estimated breeding values (GEBVs) of Big BIT individuals and families, and predictive abilities obtained by performing large-scale cross-validations. Our study provides multi-year field data-based evidence that, for inbred/variety development focused plant improvement efforts, early-stage genetic evaluation should be based on GEBVs generated from wide-area testing training datasets. This holds true for candidates for selection with or without own phenotypic records.

The Plant GenomeVol. 18(4)
Corteva (United States) (US)
Openalex Percentile: Top 11%
Genetic and phenotypic traits in livestock
1.82
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