Computational and experimental investigations of oxadiazinone reactivity with cyclooctynes and other dienophiles

Tetrazines are heterocycles famous in bioorthogonal chemistry for their fast rates of cycloadditions with strained alkenes and alkynes. Oxadiazinones are lactone analogues of tetrazines that show potential for but have not yet been exploited in bioorthogonal use. We present computational assessment and analysis of cycloadditions of oxadiazinones to several complementary bioorthogonal alkene and alkyne handles: cyclooctyne, bicyclononyne, and trans-cyclooctene gave low transition state barriers, while the similar 8-cycle dibenzocyclooctyne did not, due to greater geometric distortion; 3- and 4-membered cycloalkenes gave intermediate values. Secondary alkyne additions to oxadiazinones and analogues following retro-Diels–Alder eliminations of N 2 from adducts of initial alkyne additions are explored, as the possible reversal of electron demand from first to second addition makes them interesting tools for selective dual-addition schemes. We also show experimental rate constants up to 0.028 mol L −1 s −1 for additions of bicyclononyne to a series of oxadiazinones.

Authors

Institutions

Publication Details

Journal
Canadian Journal of Chemistry
Published
2025-10-31
DOI
https://doi.org/10.1139/cjc-2025-0195
Primary Topic
Click Chemistry and Applications
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Computational and experimental investigations of oxadiazinone reactivity with cyclooctynes and other dienophiles

Didier A. Bilodeau, John Paul Pezacki, Jason D. Josephson, Masaya Nakajima et al.
Canadian Journal of Chemistry
Click Chemistry and Applications
article

Computational and experimental investigations of oxadiazinone reactivity with cyclooctynes and other dienophiles

Didier A. Bilodeau, John Paul Pezacki, Jason D. Josephson, Masaya Nakajima, Kaitlyn Morrill
article en

Abstract

Tetrazines are heterocycles famous in bioorthogonal chemistry for their fast rates of cycloadditions with strained alkenes and alkynes. Oxadiazinones are lactone analogues of tetrazines that show potential for but have not yet been exploited in bioorthogonal use. We present computational assessment and analysis of cycloadditions of oxadiazinones to several complementary bioorthogonal alkene and alkyne handles: cyclooctyne, bicyclononyne, and trans-cyclooctene gave low transition state barriers, while the similar 8-cycle dibenzocyclooctyne did not, due to greater geometric distortion; 3- and 4-membered cycloalkenes gave intermediate values. Secondary alkyne additions to oxadiazinones and analogues following retro-Diels–Alder eliminations of N 2 from adducts of initial alkyne additions are explored, as the possible reversal of electron demand from first to second addition makes them interesting tools for selective dual-addition schemes. We also show experimental rate constants up to 0.028 mol L −1 s −1 for additions of bicyclononyne to a series of oxadiazinones.

Canadian Journal of Chemistry
Bunkyo University (JP), University of Ottawa (CA), The University of Tokyo (JP), Ottawa University (US)
Openalex Percentile: Top 76%
Click Chemistry and Applications
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.