Genetic variation and preliminary marker-trait associations for cane quality traits in a diverse world collection of sugarcane (Saccharum spp.) and wild relatives

This study examines the genetic diversity and trait associations in sugarcane, emphasizing the application of stable SNP markers linked to key characteristics, such as Brix, Polarity, and fiber content, for enhancing multiple traits through marker-assisted selection. The findings reveal significant phenotypic variation among <i>Saccharum</i> species, advocating for a broad genetic base in breeding programs. Due to sugarcane's polyploid nature, the study calls for further validation through fine mapping, gene expression analysis, and multi-location testing. Future research should enhance marker density, expand populations, and adopt new genomic approaches for effective crop improvement.

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Publication Details

Journal
Frontiers in Plant Science
Published
2025-10-30
DOI
https://doi.org/10.3389/fpls.2025.1643469
Primary Topic
Sugarcane Cultivation and Processing
Type
article
Field-Weighted Citation Impact
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article

Genetic variation and preliminary marker-trait associations for cane quality traits in a diverse world collection of sugarcane (Saccharum spp.) and wild relatives

Shamseldeen Eltaher, Hardev S. Sandhu, Gul Shad Ali, Matthew N. Rouse et al.
Frontiers in Plant Science
Sugarcane Cultivation and Processing
article

Genetic variation and preliminary marker-trait associations for cane quality traits in a diverse world collection of sugarcane (Saccharum spp.) and wild relatives

Shamseldeen Eltaher, Hardev S. Sandhu, Gul Shad Ali, Matthew N. Rouse, Sukhwinder Singh, Douglas DeStefano, Yasmeen Abuasbeh
article en

Abstract

This study examines the genetic diversity and trait associations in sugarcane, emphasizing the application of stable SNP markers linked to key characteristics, such as Brix, Polarity, and fiber content, for enhancing multiple traits through marker-assisted selection. The findings reveal significant phenotypic variation among <i>Saccharum</i> species, advocating for a broad genetic base in breeding programs. Due to sugarcane's polyploid nature, the study calls for further validation through fine mapping, gene expression analysis, and multi-location testing. Future research should enhance marker density, expand populations, and adopt new genomic approaches for effective crop improvement.

Frontiers in Plant ScienceVol. 16
Agricultural Research Service (US), Everglades University (US), University of Sadat City (EG), Clear Creek Independent School District (US)
Openalex Percentile: Top 77%
Sugarcane Cultivation and Processing
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Genetic variation and preliminary marker-trait associations for cane quality traits in a diverse world collection of sugarcane (Saccharum spp.) and wild relatives — Shamseldeen Eltaher, Hardev S. Sandhu, et al. · Frontiers in Plant Science (2025) | TGRS Research Map | TGRS