Elucidating electronic and structural changes in metal porphyrins by 1- <i>n</i> -alkyl-3-methylimidazolium cations

Metal porphyrins act as the reactive center of the ubiquitous monooxygenase, cytochrome P-450. As such, both their native and functionalized forms have been successfully utilized in studying biodegradation of a plethora of molecular substrates. Ionic liquids, although quite promising and possessing benign physicochemical properties, are poorly understood in terms of their biodegradability from a theoretical standpoint. In this article, a quantum mechanical treatment of ionic liquids 1-<i>n</i>-alkyl-3-methylimidazolium (<i>n</i> = 2, 4, 6, 8, and 10) ([C<sub><i>n</i></sub>mim]<sup>+</sup>) is carried out in the presence of a variety of metal porphyrins to understand their binding, which is the first step in the well-known catalytic cycle of cytochromes. Our treatment concerns the interaction strength between the cations and porphyrin molecules and we quantify it in terms of binding energy calculations of concerted electronic and geometrical effects. The conformations having the alkyl chain of these IL cations facing the porphyrin molecules are destabilized to the greatest extent as the chain length is enhanced along the homologous series. Structures of cation-porphyrin complexes are further analyzed by employing vibrational analysis on the active site molecules to deduce key structural features of the complexes. The reductive abilities of the metal porphyrins considered are also inferred by invoking conceptual DFT in our work through electrophilicity and Fukui reactivity indices. We uncover that the delocalized nature of the electrophilicity extends to the pyrrolic nitrogen atoms upon addition of an electron in the subsequent step to the binding. It is also demonstrated that geometrically, the core size is significantly affected upon inclusion of the cationic ligand with NiP showing the highest out of plane displacement. The motions governing the symmetry of the porphyrin macrocycle are perturbed from the native D<sub>4h</sub> to D<sub>2h</sub> in case of FeP, CoP, NiP and CuP exhibiting saddling and ruffling character and even B<sub>1u</sub> and B<sub>2u</sub> for MnP and ZnP showing doming character upon binding with [C<sub><i>n</i></sub>mim]<sup>+</sup>.

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Publication Details

Journal
Physical Chemistry Chemical Physics
Published
2025-01-01
DOI
https://doi.org/10.1039/d5cp02120k
Primary Topic
Ionic liquids properties and applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Elucidating electronic and structural changes in metal porphyrins by 1- n -alkyl-3-methylimidazolium cations

Jindal K. Shah, Atiya Banerjee
Physical Chemistry Chemical Physics
Ionic liquids properties and applications
article

Elucidating electronic and structural changes in metal porphyrins by 1- n -alkyl-3-methylimidazolium cations

Jindal K. Shah, Atiya Banerjee
article en

Abstract

Metal porphyrins act as the reactive center of the ubiquitous monooxygenase, cytochrome P-450. As such, both their native and functionalized forms have been successfully utilized in studying biodegradation of a plethora of molecular substrates. Ionic liquids, although quite promising and possessing benign physicochemical properties, are poorly understood in terms of their biodegradability from a theoretical standpoint. In this article, a quantum mechanical treatment of ionic liquids 1-<i>n</i>-alkyl-3-methylimidazolium (<i>n</i> = 2, 4, 6, 8, and 10) ([C<sub><i>n</i></sub>mim]<sup>+</sup>) is carried out in the presence of a variety of metal porphyrins to understand their binding, which is the first step in the well-known catalytic cycle of cytochromes. Our treatment concerns the interaction strength between the cations and porphyrin molecules and we quantify it in terms of binding energy calculations of concerted electronic and geometrical effects. The conformations having the alkyl chain of these IL cations facing the porphyrin molecules are destabilized to the greatest extent as the chain length is enhanced along the homologous series. Structures of cation-porphyrin complexes are further analyzed by employing vibrational analysis on the active site molecules to deduce key structural features of the complexes. The reductive abilities of the metal porphyrins considered are also inferred by invoking conceptual DFT in our work through electrophilicity and Fukui reactivity indices. We uncover that the delocalized nature of the electrophilicity extends to the pyrrolic nitrogen atoms upon addition of an electron in the subsequent step to the binding. It is also demonstrated that geometrically, the core size is significantly affected upon inclusion of the cationic ligand with NiP showing the highest out of plane displacement. The motions governing the symmetry of the porphyrin macrocycle are perturbed from the native D<sub>4h</sub> to D<sub>2h</sub> in case of FeP, CoP, NiP and CuP exhibiting saddling and ruffling character and even B<sub>1u</sub> and B<sub>2u</sub> for MnP and ZnP showing doming character upon binding with [C<sub><i>n</i></sub>mim]<sup>+</sup>.

Physical Chemistry Chemical PhysicsVol. 27(44)
Oklahoma State University (US)
National Science Foundation, Oklahoma State University, Division of Chemical, Bioengineering, Environmental, and Transport Systems
Openalex Percentile: Top 81%
Ionic liquids properties and applications
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