Machine Learning-Enabled Insights: Dihydromyricetin’s Novel Role in Inhibiting the TGF-β/ALK5 Signaling Cascade for the Treatment of Pulmonary Fibrosis

Idiopathic pulmonary fibrosis (IPF) denotes a chronic, advancing, and life-threatening lung disorder. Dysregulated cytokines, particularly those in the transforming growth factor-β (TGF-β)-associated signaling pathway, drive the pathological development of IPF. Natural products derived from traditional Chinese medicine hold great potential as promising therapeutic candidates for IPF. This study integrated machine learning (ML) with experimental validation to identify TGF-β/small mother against decapentaplegic (SMAD) pathway inhibitors from natural compounds. An in-house library was screened by means of a dual-luciferase reporter assay, revealing the flavonoid dihydromyricetin (DHM) as the most potent inhibitor. In vitro , DHM suppressed TGF-β1-triggered epithelial–mesenchymal transition (EMT) in A549 cells and fibroblast transdifferentiation in medical research council cell strain 5 (MRC-5) cells. In vivo , DHM attenuated fibrosis and inflammatory responses in a bleomycin (BLM)-triggered pulmonary fibrosis mouse model. Mechanistic studies revealed that DHM targets the type I TGF-β receptor (known as ALK5), reduces its membrane expression, binds directly to the receptor and represses its kinase activity, ultimately downregulating the TGF-β/ALK5 pathway. The present research is the first to report DHM as a TGF-β/SMAD inhibitor identified through ML with therapeutic efficacy against IPF. DHM’s anti-fibrotic effects are mediated through ALK5 blockade, suppressing downstream signaling, EMT, and fibroblast activation. These findings not only highlight DHM’s latent ability to act as a novel remedy for IPF but also underscore the utility of computational approaches in natural product drug discovery.

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Publication Details

Journal
Engineering
Published
2025-10-01
DOI
https://doi.org/10.1016/j.eng.2025.10.017
Primary Topic
Medicinal plant effects and applications
Type
article
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article

Machine Learning-Enabled Insights: Dihydromyricetin’s Novel Role in Inhibiting the TGF-β/ALK5 Signaling Cascade for the Treatment of Pulmonary Fibrosis

Luyao Dong, Congran Li, Peiyi Sun, Xuefu You et al.
Engineering
Medicinal plant effects and applications
article

Machine Learning-Enabled Insights: Dihydromyricetin’s Novel Role in Inhibiting the TGF-β/ALK5 Signaling Cascade for the Treatment of Pulmonary Fibrosis

Luyao Dong, Congran Li, Peiyi Sun, Xuefu You, Jian‐Dong Jiang, Xinyi Yang, Yixin Ren, Wenting Dong, Xiukun Wang, Meng Yao, Guoqing Li, Hao Wang, Chunjie Xu
article en

Abstract

Idiopathic pulmonary fibrosis (IPF) denotes a chronic, advancing, and life-threatening lung disorder. Dysregulated cytokines, particularly those in the transforming growth factor-β (TGF-β)-associated signaling pathway, drive the pathological development of IPF. Natural products derived from traditional Chinese medicine hold great potential as promising therapeutic candidates for IPF. This study integrated machine learning (ML) with experimental validation to identify TGF-β/small mother against decapentaplegic (SMAD) pathway inhibitors from natural compounds. An in-house library was screened by means of a dual-luciferase reporter assay, revealing the flavonoid dihydromyricetin (DHM) as the most potent inhibitor. In vitro , DHM suppressed TGF-β1-triggered epithelial–mesenchymal transition (EMT) in A549 cells and fibroblast transdifferentiation in medical research council cell strain 5 (MRC-5) cells. In vivo , DHM attenuated fibrosis and inflammatory responses in a bleomycin (BLM)-triggered pulmonary fibrosis mouse model. Mechanistic studies revealed that DHM targets the type I TGF-β receptor (known as ALK5), reduces its membrane expression, binds directly to the receptor and represses its kinase activity, ultimately downregulating the TGF-β/ALK5 pathway. The present research is the first to report DHM as a TGF-β/SMAD inhibitor identified through ML with therapeutic efficacy against IPF. DHM’s anti-fibrotic effects are mediated through ALK5 blockade, suppressing downstream signaling, EMT, and fibroblast activation. These findings not only highlight DHM’s latent ability to act as a novel remedy for IPF but also underscore the utility of computational approaches in natural product drug discovery.

Engineering
Minzu University of China (CN), Chinese Academy of Medical Sciences & Peking Union Medical College (CN)
Openalex Percentile: Top 52%
Medicinal plant effects and applications
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