A Chromosome-scale Genome Assembly for the Broad-leaved Bamboo Indocalamus tessellatus
Indocalamus tessellatus, a broad-leaved bamboo species, holds significant economic and ecological value. However, the absence of a high-quality reference genome has constrained genetic and functional studies of this species. Here, we report a chromosome-scale genome assembly of I. tessellatus, constructed by integrating PacBio HiFi and Hi-C sequencing technologies. The final assembly is 2.89 Gb with a scaffold N50 of 117.66 Mb. BUSCO assessment against the poales_odb10 dataset revealed 99.0% completeness, indicating the high quality of the assembly. Additionally, a total of 41,765 protein-coding genes were predicted, offering a critical resource for functional annotation and comparative genomics. This reference genome establishes a foundation for studies on I. tessellatus biology, breeding, and conservation.
Authors
- Xianjun Deng (ORCID: https://orcid.org/0000-0001-5756-9765)
- Site Luo (ORCID: https://orcid.org/0000-0003-2028-0241)
- Xianshixuan Liu
- Cheng Zhou (ORCID: https://orcid.org/0000-0002-4091-4777)
- Daomin Chen
- Zhe Chen (ORCID: https://orcid.org/0000-0001-5059-5290)
- Yikun Wang (ORCID: https://orcid.org/0000-0001-9263-2168)
- Weicheng Zheng (ORCID: https://orcid.org/0000-0002-0405-2559)
- Xiaoqing Hu (ORCID: https://orcid.org/0009-0004-3374-9197)
- Qian Xu (ORCID: https://orcid.org/0000-0002-6010-0148)
- Aiwu Jin
- Yufang Wu
- Qianggen Zhu
- Xiaofang Yan
- W Qiu
Institutions
- Xiamen University (CN)
- Lishui University (CN)
- Lishui Academy of Forestry (CN)
Publication Details
- Journal
- Scientific Data
- Published
- 2025-10-28
- DOI
- https://doi.org/10.1038/s41597-025-05988-5
- Primary Topic
- Chromosomal and Genetic Variations
- Type
- article
- Field-Weighted Citation Impact
- 0.00