The complete plastid genome of <i>Crepidium calophyllum</i> (Orchidaceae: Malaxidinae) and phylogenetic analysis
<i>Crepidium calophyllum</i> is a terrestrial orchid native to tropical forests in southern China and Southeast Asia. Once classified under <i>Malaxis</i>, it has since been reassigned to <i>Crepidium</i>. This study presents the first complete plastid genome (plastome) of <i>C. calophyllum</i>, which is 158,884 bp in length. Its gene content and order are highly conserved compared to other autotrophic species within Malaxidinae. Phylogenomic analyses using both maximum likelihood and Bayesian inference, based on complete plastomes, place <i>C. calophyllum</i> within <i>Crepidium</i>, as sister to <i>Dienia</i>. Interestingly, these analyses also reveal the polyphyly of <i>Malaxis</i> and <i>Liparis</i>, suggesting unresolved taxonomic issues within Malaxidinae.
Authors
- Baiyin Yu
- Ran Yu (ORCID: https://orcid.org/0000-0002-7692-1071)
- Shengxin Chang
- Kwo-Ching Huang
- Chunxia Li (ORCID: https://orcid.org/0000-0002-7279-7341)
- Ling Lu (ORCID: https://orcid.org/0000-0003-1369-9538)
- Wei Han (ORCID: https://orcid.org/0000-0001-6841-1357)
Institutions
- Shaoguan University (CN)
- Guangdong Food and Drug Vocational College (CN)
Publication Details
- Journal
- Mitochondrial DNA Part B
- Published
- 2025-10-28
- DOI
- https://doi.org/10.1080/23802359.2025.2579078
- Primary Topic
- Biological and pharmacological studies of plants
- Type
- article
- Field-Weighted Citation Impact
- 0.00