Neural Eigenfunctions are Structured Representation Learners

This paper revisits the canonical concept of learning structured representations without label supervision by eigendecomposition. Yet, unlike prior spectral methods such as Laplacian Eigenmap which operate in a nonparametric manner, we aim to parametrically model the principal eigenfunctions of an integral operator defined by a kernel and a data distribution using a neural network for enhanced scalability and reasonable out-of-sample generalization. To achieve this goal, we first present a new series of objective functions that generalize the EigenGame Gemp et al. 2020 to function space for learning neural eigenfunctions. We then show that, when the similarity metric is derived from positive relations in a data augmentation setup, a representation learning objective function that resembles those of popular self-supervised learning methods emerges, with an additional symmetry-breaking property for producing structured representations where features are ordered by importance. We call such a structured, adaptive-length deep representation Neural Eigenmap. We demonstrate using Neural Eigenmap as adaptive-length codes in image retrieval systems. By truncation according to feature importance, our method requires up to $16\times$16× shorter representation length than leading self-supervised learning ones to achieve similar retrieval performance. We further apply our method to graph data and report strong results on a node representation learning benchmark with more than one million nodes.

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Publication Details

Journal
IEEE Transactions on Pattern Analysis and Machine Intelligence
Published
2025-10-27
DOI
https://doi.org/10.1109/tpami.2025.3625728
Primary Topic
Neural Networks and Applications
Type
article
Field-Weighted Citation Impact
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article

Neural Eigenfunctions are Structured Representation Learners

Jiaxin Shi, Cewu Lu, Hao Zhang, Jun Zhu et al.
IEEE Transactions on Pattern Analysis and Machine Intelligence
Neural Networks and Applications
article

Neural Eigenfunctions are Structured Representation Learners

Jiaxin Shi, Cewu Lu, Hao Zhang, Jun Zhu, Peng Cui, Zhijie Deng
article en

Abstract

This paper revisits the canonical concept of learning structured representations without label supervision by eigendecomposition. Yet, unlike prior spectral methods such as Laplacian Eigenmap which operate in a nonparametric manner, we aim to parametrically model the principal eigenfunctions of an integral operator defined by a kernel and a data distribution using a neural network for enhanced scalability and reasonable out-of-sample generalization. To achieve this goal, we first present a new series of objective functions that generalize the EigenGame Gemp et al. 2020 to function space for learning neural eigenfunctions. We then show that, when the similarity metric is derived from positive relations in a data augmentation setup, a representation learning objective function that resembles those of popular self-supervised learning methods emerges, with an additional symmetry-breaking property for producing structured representations where features are ordered by importance. We call such a structured, adaptive-length deep representation Neural Eigenmap. We demonstrate using Neural Eigenmap as adaptive-length codes in image retrieval systems. By truncation according to feature importance, our method requires up to $16\times$16× shorter representation length than leading self-supervised learning ones to achieve similar retrieval performance. We further apply our method to graph data and report strong results on a node representation learning benchmark with more than one million nodes.

IEEE Transactions on Pattern Analysis and Machine IntelligenceVol. 48(3)
Shanghai Jiao Tong University (CN), Google DeepMind (United Kingdom) (GB), Institute of Mathematics and Computer Science (MD), Xenobe Research Institute (US), Google (United Kingdom) (GB), Tsinghua University (CN)
Openalex Percentile: Top 84%
Neural Networks and Applications
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Neural Eigenfunctions are Structured Representation Learners — Jiaxin Shi, Cewu Lu, et al. · IEEE Transactions on Pattern Analysis and Machine Intelligence (2025) | TGRS Research Map | TGRS