Exploring New Horizons: fNIRS and Machine Learning in Understanding PostCOVID-19

PostCOVID-19 is a condition affecting approximately 10% of individuals infected with SARS-CoV-2, presenting significant challenges in diagnosis and clinical management. Portable neuroimaging techniques, such as functional near-infrared spectroscopy (fNIRS), offer real-time insights into cerebral hemodynamics and represent a promising tool for studying postCOVID-19 in naturalistic settings. This study investigates the integration of fNIRS with machine learning to identify neural correlates of postCOVID-19. A total of six machine learning classifiers—Random Forest, Support Vector Machine (SVM), K-Nearest Neighbors (KNNs), XGBoost, Logistic Regression, and Multi-Layer Perceptron (MLP)—were evaluated using a stratified subject-aware cross-validation scheme on a dataset comprising 29,737 time-series samples from 37 participants (9 postCOVID-19, 28 controls). Four different feature representation strategies were compared: raw time-series, PCA-based dimensionality reduction, statistical feature extraction, and a hybrid approach that combines time-series and statistical descriptors. Among these, the hybrid representation demonstrated the highest discriminative performance. The SVM classifier trained on hybrid features achieved strong discrimination (ROC-AUC = 0.909) under subject-aware CV5; at the default threshold, Sensitivity was moderate and Specificity was high, outperforming all other methods. In contrast, models trained on statistical features alone exhibited limited Sensitivity despite high Specificity. These findings highlight the importance of temporal information in the fNIRS signal and support the potential of machine learning combined with portable neuroimaging for postCOVID-19 identification. This approach may contribute to the development of non-invasive diagnostic tools to support individualized treatment and longitudinal monitoring of patients with persistent neurological symptoms.

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Journal
Machine Learning and Knowledge Extraction
Published
2025-10-24
DOI
https://doi.org/10.3390/make7040129
Primary Topic
Optical Imaging and Spectroscopy Techniques
Type
article
Field-Weighted Citation Impact
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article

Exploring New Horizons: fNIRS and Machine Learning in Understanding PostCOVID-19

V. Herrera, Antony Morales-Cervantes, Blanca Nohemí Zamora-Mendoza, Edgar Guevara et al.
Machine Learning and Knowledge Extraction
Optical Imaging and Spectroscopy Techniques
article

Exploring New Horizons: fNIRS and Machine Learning in Understanding PostCOVID-19

V. Herrera, Antony Morales-Cervantes, Blanca Nohemí Zamora-Mendoza, Edgar Guevara, Rogelio Flores‐Ramírez, Aaron A. López-Cano
article en

Abstract

PostCOVID-19 is a condition affecting approximately 10% of individuals infected with SARS-CoV-2, presenting significant challenges in diagnosis and clinical management. Portable neuroimaging techniques, such as functional near-infrared spectroscopy (fNIRS), offer real-time insights into cerebral hemodynamics and represent a promising tool for studying postCOVID-19 in naturalistic settings. This study investigates the integration of fNIRS with machine learning to identify neural correlates of postCOVID-19. A total of six machine learning classifiers—Random Forest, Support Vector Machine (SVM), K-Nearest Neighbors (KNNs), XGBoost, Logistic Regression, and Multi-Layer Perceptron (MLP)—were evaluated using a stratified subject-aware cross-validation scheme on a dataset comprising 29,737 time-series samples from 37 participants (9 postCOVID-19, 28 controls). Four different feature representation strategies were compared: raw time-series, PCA-based dimensionality reduction, statistical feature extraction, and a hybrid approach that combines time-series and statistical descriptors. Among these, the hybrid representation demonstrated the highest discriminative performance. The SVM classifier trained on hybrid features achieved strong discrimination (ROC-AUC = 0.909) under subject-aware CV5; at the default threshold, Sensitivity was moderate and Specificity was high, outperforming all other methods. In contrast, models trained on statistical features alone exhibited limited Sensitivity despite high Specificity. These findings highlight the importance of temporal information in the fNIRS signal and support the potential of machine learning combined with portable neuroimaging for postCOVID-19 identification. This approach may contribute to the development of non-invasive diagnostic tools to support individualized treatment and longitudinal monitoring of patients with persistent neurological symptoms.

Machine Learning and Knowledge ExtractionVol. 7(4)
Autonomous University of San Luis Potosí (MX), Instituto Tecnológico de Morelia (MX)
Openalex Percentile: Top 55%
Optical Imaging and Spectroscopy Techniques
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