S480 Advanced Machine Learning Framework for Predicting Polyp Evolution and Malignancy Risk in Gastroenterology: A Novel Approach to Personalized Surveillance and Early Intervention

Introduction: Early prediction of polyp progression and malignancy is critical in gastroenterology to guide timely intervention for high-risk cases. Conventional approaches often overlook the dynamic nature of lesion development and fail to integrate multimodal data, limiting their prognostic power. To address these gaps, we present a novel machine-learning framework that combines longitudinal simulation, advanced imaging analysis, and patient metadata to enhance prediction of polyp evolution and risk stratification. Methods: We used the ERC PMP-v5 dataset, comprising 796 high-resolution images and 21 annotated endoscopic videos from 217 patients, to train and test our models. Two complementary pipelines were developed. The polyp evolution model: We generated synthetic time-series sequences over 30 months at 6-month intervals to simulate growth trajectories. A Long Short-Term Memory (LSTM)-based regressor, trained on these artificial sequences, predicted size changes with a mean absolute error (MAE) of 0.0689. Concurrently, a transformer-based classifier distinguished morphological transitions (e.g., tubular to villous or adenocarcinoma) with 85 percent accuracy. These outputs yield interval-specific clinical insights. The second pipeline, fusion model for malignancy and recurrence, used extracted imaging features via a Vision Transformer and encoded clinical metadata (age, family history, histology, etc.). A fusion network combined these inputs to predict malignancy risk and recurrence, achieving 99.89 percent accuracy. Patients were stratified into low, moderate, and high-risk categories to inform surveillance intervals. Results: The LSTM regressor reliably forecasted critical size milestones—predicting a 0.09 cm tubular polyp at 6 months (low risk) and a 0.30 cm villous lesion at 30 months (high risk). The transformer classifier accurately identified high-risk morphology changes, enabling early clinical action. The fusion model’s near-perfect accuracy in malignancy and recurrence prediction facilitated clear risk stratification: low-risk patients were advised follow-up in 1–3 years, moderate-risk in 6–12 months, and high-risk within 3–6 months. Conclusion: By integrating LSTM and transformer architectures with a ViT-based fusion approach, our framework delivers precise predictions of polyp growth, morphological transformation, and malignancy risk. This method supports personalized surveillance recommendations and prioritizes high-risk cases, underscoring the potential of advanced machine learning to transform decision-making in gastroenterology.

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Publication Details

Journal
The American Journal of Gastroenterology
Published
2025-10-01
DOI
https://doi.org/10.14309/01.ajg.0001129380.95509.0e
Primary Topic
Radiomics and Machine Learning in Medical Imaging
Type
article
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article

S480 Advanced Machine Learning Framework for Predicting Polyp Evolution and Malignancy Risk in Gastroenterology: A Novel Approach to Personalized Surveillance and Early Intervention

Gautam Maddineni, Sri Harsha Boppana, Manaswitha Thota, C. David Mintz et al.
The American Journal of Gastroenterology
Radiomics and Machine Learning in Medical Imaging
article

S480 Advanced Machine Learning Framework for Predicting Polyp Evolution and Malignancy Risk in Gastroenterology: A Novel Approach to Personalized Surveillance and Early Intervention

Gautam Maddineni, Sri Harsha Boppana, Manaswitha Thota, C. David Mintz, Sachin Sravan Kumar Komati
article en

Abstract

Introduction: Early prediction of polyp progression and malignancy is critical in gastroenterology to guide timely intervention for high-risk cases. Conventional approaches often overlook the dynamic nature of lesion development and fail to integrate multimodal data, limiting their prognostic power. To address these gaps, we present a novel machine-learning framework that combines longitudinal simulation, advanced imaging analysis, and patient metadata to enhance prediction of polyp evolution and risk stratification. Methods: We used the ERC PMP-v5 dataset, comprising 796 high-resolution images and 21 annotated endoscopic videos from 217 patients, to train and test our models. Two complementary pipelines were developed. The polyp evolution model: We generated synthetic time-series sequences over 30 months at 6-month intervals to simulate growth trajectories. A Long Short-Term Memory (LSTM)-based regressor, trained on these artificial sequences, predicted size changes with a mean absolute error (MAE) of 0.0689. Concurrently, a transformer-based classifier distinguished morphological transitions (e.g., tubular to villous or adenocarcinoma) with 85 percent accuracy. These outputs yield interval-specific clinical insights. The second pipeline, fusion model for malignancy and recurrence, used extracted imaging features via a Vision Transformer and encoded clinical metadata (age, family history, histology, etc.). A fusion network combined these inputs to predict malignancy risk and recurrence, achieving 99.89 percent accuracy. Patients were stratified into low, moderate, and high-risk categories to inform surveillance intervals. Results: The LSTM regressor reliably forecasted critical size milestones—predicting a 0.09 cm tubular polyp at 6 months (low risk) and a 0.30 cm villous lesion at 30 months (high risk). The transformer classifier accurately identified high-risk morphology changes, enabling early clinical action. The fusion model’s near-perfect accuracy in malignancy and recurrence prediction facilitated clear risk stratification: low-risk patients were advised follow-up in 1–3 years, moderate-risk in 6–12 months, and high-risk within 3–6 months. Conclusion: By integrating LSTM and transformer architectures with a ViT-based fusion approach, our framework delivers precise predictions of polyp growth, morphological transformation, and malignancy risk. This method supports personalized surveillance recommendations and prioritizes high-risk cases, underscoring the potential of advanced machine learning to transform decision-making in gastroenterology.

The American Journal of GastroenterologyVol. 120(10S2)
Openalex Percentile: Top 55%
Radiomics and Machine Learning in Medical Imaging
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