Improving outbreak forecasts through model augmentation

Accurate forecasts of disease outbreaks are critical for effective public health responses, management of healthcare surge capacity, and communication of public risk. There are a growing number of powerful forecasting methods that fall into two broad categories-empirical models that extrapolate from historical data, and mechanistic models based on fixed epidemiological assumptions. However, these methods often underperform precisely when reliable predictions are most urgently needed-during periods of rapid epidemic escalation. Here, we introduce epimodulation, a hybrid approach that integrates fundamental epidemiological principles into existing predictive models to enhance forecasting accuracy, especially around epidemic peaks. When applied to empirical and machine learning forecasting methods (Autoregressive Integrated Moving Average, Holt-Winters, gradient-boosting machines, Prophet, and spline models), epimodulation improved overall prediction accuracy by an average of 12.3% (range: 8.5 to 18.7%) for COVID-19 hospital admissions and by 32.9% (range: 24.2 to 43.7%) for influenza hospital admissions; accuracy during epidemic peaks improved even further, by an average of 27.9% and 43.8%, respectively. Epimodulation also substantially enhanced the performance of complex forecasting methods, including the COVID-19 Forecast Hub ensemble model, demonstrating its broad utility in improving forecast reliability at critical moments in disease outbreaks.

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Publication Details

Journal
Proceedings of the National Academy of Sciences
Published
2025-10-24
DOI
https://doi.org/10.1073/pnas.2508575122
Citations
1
Primary Topic
COVID-19 epidemiological studies
Type
article
Field-Weighted Citation Impact
1.37
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article

Improving outbreak forecasts through model augmentation

Emily Javan, Michael Lachmann, Susan E. Ptak, Spencer J. Fox et al.
1 citations
Proceedings of the National Academy of Sciences
COVID-19 epidemiological studies
1.37
article

Improving outbreak forecasts through model augmentation

Emily Javan, Michael Lachmann, Susan E. Ptak, Spencer J. Fox, Lauren Ancel Meyers, Oluwasegun M. Ibrahim, Graham Casey Gibson
article en
1 citations

Abstract

Accurate forecasts of disease outbreaks are critical for effective public health responses, management of healthcare surge capacity, and communication of public risk. There are a growing number of powerful forecasting methods that fall into two broad categories-empirical models that extrapolate from historical data, and mechanistic models based on fixed epidemiological assumptions. However, these methods often underperform precisely when reliable predictions are most urgently needed-during periods of rapid epidemic escalation. Here, we introduce epimodulation, a hybrid approach that integrates fundamental epidemiological principles into existing predictive models to enhance forecasting accuracy, especially around epidemic peaks. When applied to empirical and machine learning forecasting methods (Autoregressive Integrated Moving Average, Holt-Winters, gradient-boosting machines, Prophet, and spline models), epimodulation improved overall prediction accuracy by an average of 12.3% (range: 8.5 to 18.7%) for COVID-19 hospital admissions and by 32.9% (range: 24.2 to 43.7%) for influenza hospital admissions; accuracy during epidemic peaks improved even further, by an average of 27.9% and 43.8%, respectively. Epimodulation also substantially enhanced the performance of complex forecasting methods, including the COVID-19 Forecast Hub ensemble model, demonstrating its broad utility in improving forecast reliability at critical moments in disease outbreaks.

Proceedings of the National Academy of SciencesVol. 122(43)
Santa Fe Institute (US), Los Alamos National Laboratory (US), University of Georgia (US), Institute of Bioinformatics (IN), Artificial Intelligence in Medicine (Canada) (CA), Arizona State University (US), The University of Texas at Austin (US)
Openalex Percentile: Top 16%
COVID-19 epidemiological studies
1.37
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