An Efficient CO <sub>2</sub> ‐Upcycling Platform Based on Engineered <i>Halomonas</i> TD with Enhanced Acetate‐Utilizing Capacity via Adaptive Laboratory Evolution

Biohybrid conversion of carbon dioxide (CO<sub>2</sub>) into value-added bioproducts via engineered microbes using CO<sub>2</sub>-derived electrolytes (CDE) addresses global CO<sub>2</sub> emissions, but most recombinants have poor saline CDE tolerance and low carbon conversion rate (CCR). Herein, Halomonas TD (salt-resistant) was adaptively evolved into TD80, which efficiently uses acetate; its aceE gene mutation (encoding pyruvate dehydrogenase) drives acetate utilization. Subsequently, different biosynthesis pathways in TD80 enabled high yields of poly-3-hydroxybutyrate (PHB), poly-3-hydroxybutyrate-co-4-hydroxybutyrate (P34HB), 3-hydroxybutyrate (3HB), violacein, ectoine, 1,3-diaminopropane (1,3-DAP) and superoxide dismutase (SOD), respectively. Moreover, 26.0 g L<sup>-1</sup> ectoine and 29.6 g L<sup>-1</sup> PHB can be achieved by recombinant TD80 strains during fed-batch studies. Finally, a non-canonical pathway was designed to recycle the excess malonyl-CoA into PHB. The resultant PHB content in fed-batch study was increased from 60 wt% to 80 wt%. Moreover, co-producing ectoine and PHB could further boost the CCR of CDE-to-product up to 53.7 mol%, which exemplified promising potential for biohybrid CO<sub>2</sub> upcycling involved in carbon capture and utilization system. Furthermore, TD80 was engineered to grow on formate only aiming to achieve the full use of CDE. The establishment of technology and economy assessment (TEA) confirmed the Halomonas-based platform's efficiency and economic viability for carbon footprint reduction.

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Journal
Advanced Science
Published
2025-10-24
DOI
https://doi.org/10.1002/advs.202513060
Primary Topic
Microbial Metabolic Engineering and Bioproduction
Type
article
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article

An Efficient CO 2 ‐Upcycling Platform Based on Engineered Halomonas TD with Enhanced Acetate‐Utilizing Capacity via Adaptive Laboratory Evolution

Hongbing Shen, Rong Deng, Yuhang Wang, Yunhua Chang et al.
Advanced Science
Microbial Metabolic Engineering and Bioproduction
article

An Efficient CO 2 ‐Upcycling Platform Based on Engineered Halomonas TD with Enhanced Acetate‐Utilizing Capacity via Adaptive Laboratory Evolution

Hongbing Shen, Rong Deng, Yuhang Wang, Yunhua Chang, Jianwen Ye, Lin Xia, Wei Situ, Jie Xing, Chi Wang, Tingting Chen, Yonggang Li, Yu Chen, Hui Wang, Wei Guo, Ye Tian, Y. J. Xiao, Yujiao Yang, Yina Lin
article en

Abstract

Biohybrid conversion of carbon dioxide (CO<sub>2</sub>) into value-added bioproducts via engineered microbes using CO<sub>2</sub>-derived electrolytes (CDE) addresses global CO<sub>2</sub> emissions, but most recombinants have poor saline CDE tolerance and low carbon conversion rate (CCR). Herein, Halomonas TD (salt-resistant) was adaptively evolved into TD80, which efficiently uses acetate; its aceE gene mutation (encoding pyruvate dehydrogenase) drives acetate utilization. Subsequently, different biosynthesis pathways in TD80 enabled high yields of poly-3-hydroxybutyrate (PHB), poly-3-hydroxybutyrate-co-4-hydroxybutyrate (P34HB), 3-hydroxybutyrate (3HB), violacein, ectoine, 1,3-diaminopropane (1,3-DAP) and superoxide dismutase (SOD), respectively. Moreover, 26.0 g L<sup>-1</sup> ectoine and 29.6 g L<sup>-1</sup> PHB can be achieved by recombinant TD80 strains during fed-batch studies. Finally, a non-canonical pathway was designed to recycle the excess malonyl-CoA into PHB. The resultant PHB content in fed-batch study was increased from 60 wt% to 80 wt%. Moreover, co-producing ectoine and PHB could further boost the CCR of CDE-to-product up to 53.7 mol%, which exemplified promising potential for biohybrid CO<sub>2</sub> upcycling involved in carbon capture and utilization system. Furthermore, TD80 was engineered to grow on formate only aiming to achieve the full use of CDE. The establishment of technology and economy assessment (TEA) confirmed the Halomonas-based platform's efficiency and economic viability for carbon footprint reduction.

Advanced ScienceVol. 13(3)
Sun Yat-sen University (CN), China University of Petroleum, Beijing (CN), China University of Geosciences (Beijing) (CN), Guangzhou Experimental Station (CN), Sixth Affiliated Hospital of Sun Yat-sen University (CN), Yingkou Institute of Technology (CN), Beike Biotechnology (China) (CN), China Railway Construction Corporation (China) (CN), Shenzhen Institutes of Advanced Technology (CN), Kai Biotech (South Korea) (KR), Guangdong Food and Drug Vocational College (CN), Nano Carbon (Poland) (PL), South China University of Technology (CN)
Openalex Percentile: Top 73%
Microbial Metabolic Engineering and Bioproduction
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