Tomtom-lite: accelerating Tomtom enables large-scale and real-time motif similarity scoring

Our implementation of Tomtom is freely available as a Python package at https://github.com/jmschrei/memesuite-lite, which can be downloaded via pip install memelite or at https://zenodo.org/records/17008952.

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Publication Details

Journal
Bioinformatics
Published
2025-10-15
DOI
https://doi.org/10.1093/bioinformatics/btaf577
Citations
2
Primary Topic
Gene expression and cancer classification
Type
article
Field-Weighted Citation Impact
1.61
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article

Tomtom-lite: accelerating Tomtom enables large-scale and real-time motif similarity scoring

Jacob Matthew Schreiber
2 citations
Bioinformatics
Gene expression and cancer classification
1.61
article

Tomtom-lite: accelerating Tomtom enables large-scale and real-time motif similarity scoring

Jacob Matthew Schreiber
article en
2 citations

Abstract

Our implementation of Tomtom is freely available as a Python package at https://github.com/jmschrei/memesuite-lite, which can be downloaded via pip install memelite or at https://zenodo.org/records/17008952.

BioinformaticsVol. 41(11)
University of Massachusetts Chan Medical School (US), Research Institute of Molecular Pathology (AT), Vienna Biocenter (AT)
Openalex Percentile: Top 14%
Gene expression and cancer classification
1.61
DOIOpen Access PDFOpenAlex
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