Solvent-mediated mechanism and kinetics of glucose mutarotation from enhanced sampling simulations
Understanding how solvent molecules participate in chemical reaction mechanisms remains a central challenge in molecular simulations. Here, we investigate the mechanism and kinetics of glucose mutarotation in aqueous solution using a combined well-tempered metadynamics and mean force integration approach, within the framework of canonical transition state theory. We compute free energy landscapes and kinetic rate coefficients for the α → β mutarotation in pure water, as well as in systems representative of water/methanol and water/acetone mixtures. Our simulations indicate that ring opening and closure occur via concerted, solvent-assisted pathways, with ring opening identified as the rate-determining step. The temperature dependence of the predicted kinetic constant is quantitatively consistent with experimental data, while the reactivity modulation by organic co-solvents is captured qualitatively. Overall, the results provide molecular-level insight into solvent-mediated carbohydrate chemistry, demonstrating that the solvent participates in all key reactive steps and highlighting how enhanced sampling techniques can yield mechanistic and kinetic information in explicitly solvated reactive systems.
Authors
- Marco Mazzotti (ORCID: https://orcid.org/0000-0002-4948-6705)
- Matteo Salvalaglio (ORCID: https://orcid.org/0000-0003-3371-2090)
- Matteo Paloni (ORCID: https://orcid.org/0000-0003-4841-9321)
- Francesco Serse (ORCID: https://orcid.org/0000-0003-4250-631X)
- Silvio Trespi
Institutions
- Thomas Young Centre (GB)
- ETH Zurich (CH)
- University College London (GB)
- Politecnico di Milano (IT)
Publication Details
- Journal
- The Journal of Chemical Physics
- Published
- 2025-10-23
- DOI
- https://doi.org/10.1063/5.0288357
- Primary Topic
- Protein Structure and Dynamics
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- UK Research and Innovation