Phytochemical investigation, antimicrobial activities, and molecular docking studies on endemic <i>Gelasia sericea</i> (Aucher ex DC.) Zaika, Sukhor. &amp; N.Kilian grown in Türkiye

In this study, activity-guided isolation of the endemic <i>Gelasia sericea</i> (Aucher ex DC.) Zaika, Sukhor. & N.Kilian yielded five new compounds (8-<i>O</i>-<i>β</i>-<i>D</i>-glucopyranosyl-6-hydroxy-3-(4-hydroxyphenyl)-1<i>H</i>-isochromen-1-one (<b>1</b>), <i>rel.</i> (3 <i>R</i>,3'<i>S</i>)-8,8'-oxy<i>bis</i>[6-hydroxy-3-(4-hydroxyphenyl)-3,4-dihydro-1<i>H</i>-isochromen-1-one] (<b>2</b>), 3-<i>O</i>-(4-<i>O</i>-glyceryl)-<i>α</i>-<i>D</i>-xylopyranosyl-5-methyl-4<i>H</i>-pyran-4-one (<b>3</b>), 2-carboxyl-3-hydroxy-4'-methoxy-5-<i>O</i>-(3-<i>O</i>-glyceryl)-<i>β</i>-<i>D</i>-xylopyranosylbibenzyl (<b>4</b>), and 2-carboxyl-3,4'-dihydroxy-5-<i>O</i>-(<i>β</i>-<i>D</i>-apiofuranosyl)-(1→6)-<i>β</i>-D-glucopyranosylbibenzyl (<b>5</b>). Five known compounds as <i>p</i>-coumaric acid (<b>6</b>), scorzopigmecosite (<b>7</b>), scorzocreticin (<b>8</b>), quercetin (<b>9</b>), and kelampayoside A (<b>10</b>). Spectroscopic methods were used to characterise the structures of compounds <b>1-10</b>. All the isolated compounds, except compound <b>10</b>, exhibited an inhibition zone diameter of 10-12 mm against at least one of the nine different microorganisms tested. Compound <b>8</b> was found to be the most effective with an MIC value of 12.5 μg/mL against <i>Pseudomonas aeruginosa</i>. Additionally, molecular docking analysis of compounds <b>1-10</b> was performed, targeting <i>P. aeruginosa</i> RhlR and DNA gyrase B enzymes. Among the identified compounds, compound 2 exhibited the most promising inhibitory activity against both targets, with binding energies of -12.0 and -11.3 kcal/mol, respectively.

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Journal
Natural Product Research
Published
2025-10-22
DOI
https://doi.org/10.1080/14786419.2025.2571858
Primary Topic
Phytochemistry and Biological Activities
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article
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article

Phytochemical investigation, antimicrobial activities, and molecular docking studies on endemic Gelasia sericea (Aucher ex DC.) Zaika, Sukhor. & N.Kilian grown in Türkiye

Uğur Uzuner, Büşra Korkmaz, Nurettin Yaylı, Arif Bozdeveci et al.
Natural Product Research
Phytochemistry and Biological Activities
article

Phytochemical investigation, antimicrobial activities, and molecular docking studies on endemic Gelasia sericea (Aucher ex DC.) Zaika, Sukhor. & N.Kilian grown in Türkiye

Uğur Uzuner, Büşra Korkmaz, Nurettin Yaylı, Arif Bozdeveci, Serdar Makbul, Büşra Şahin, Gözde Bozdal, Murat Emre Abanoz
article en

Abstract

In this study, activity-guided isolation of the endemic <i>Gelasia sericea</i> (Aucher ex DC.) Zaika, Sukhor. & N.Kilian yielded five new compounds (8-<i>O</i>-<i>β</i>-<i>D</i>-glucopyranosyl-6-hydroxy-3-(4-hydroxyphenyl)-1<i>H</i>-isochromen-1-one (<b>1</b>), <i>rel.</i> (3 <i>R</i>,3'<i>S</i>)-8,8'-oxy<i>bis</i>[6-hydroxy-3-(4-hydroxyphenyl)-3,4-dihydro-1<i>H</i>-isochromen-1-one] (<b>2</b>), 3-<i>O</i>-(4-<i>O</i>-glyceryl)-<i>α</i>-<i>D</i>-xylopyranosyl-5-methyl-4<i>H</i>-pyran-4-one (<b>3</b>), 2-carboxyl-3-hydroxy-4'-methoxy-5-<i>O</i>-(3-<i>O</i>-glyceryl)-<i>β</i>-<i>D</i>-xylopyranosylbibenzyl (<b>4</b>), and 2-carboxyl-3,4'-dihydroxy-5-<i>O</i>-(<i>β</i>-<i>D</i>-apiofuranosyl)-(1→6)-<i>β</i>-D-glucopyranosylbibenzyl (<b>5</b>). Five known compounds as <i>p</i>-coumaric acid (<b>6</b>), scorzopigmecosite (<b>7</b>), scorzocreticin (<b>8</b>), quercetin (<b>9</b>), and kelampayoside A (<b>10</b>). Spectroscopic methods were used to characterise the structures of compounds <b>1-10</b>. All the isolated compounds, except compound <b>10</b>, exhibited an inhibition zone diameter of 10-12 mm against at least one of the nine different microorganisms tested. Compound <b>8</b> was found to be the most effective with an MIC value of 12.5 μg/mL against <i>Pseudomonas aeruginosa</i>. Additionally, molecular docking analysis of compounds <b>1-10</b> was performed, targeting <i>P. aeruginosa</i> RhlR and DNA gyrase B enzymes. Among the identified compounds, compound 2 exhibited the most promising inhibitory activity against both targets, with binding energies of -12.0 and -11.3 kcal/mol, respectively.

Natural Product Research
Artvin Coruh University (TR), Recep Tayyip Erdoğan University (TR), Karadeniz Technical University (TR)
Openalex Percentile: Top 78%
Phytochemistry and Biological Activities
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