From Chaos to Clarity: Deriving Meaningful Biology from Big Data in Plant Pathology

This Focus Issue was inspired by the vast volumes of data now being generated from both laboratory experiments and field studies. These complex, high dimensional data sets demand new analytic approaches. We invited contributions that apply novel statistical, machine learning, or artificial intelligence methods, or that integrate multiple 'omics approaches to reveal new aspects of pathogen biology, host interactions, or emergent system-level properties. The Focus Issue contains 13 articles falling into five broad themes and drawing upon a diverse range of data types, from disease imaging to meta-barcoding data to optical sensing to genetic data to expert knowledge. Together, these papers show how integrating technology, data, and biology is already transforming plant pathology. We hope this Focus Issue inspires new collaborations, new methods, and a continued commitment to turning data into understanding and chaos into clarity. [Formula: see text] The author(s) have dedicated the work to the public domain under the Creative Commons CC0 "No Rights Reserved" license by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law, 2025.

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Publication Details

Journal
Phytopathology
Published
2025-10-01
DOI
https://doi.org/10.1094/phyto-10-25-0328-fi
Primary Topic
Plant Pathogens and Resistance
Type
article
Field-Weighted Citation Impact
0.00
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article

From Chaos to Clarity: Deriving Meaningful Biology from Big Data in Plant Pathology

Nik J. Cunniffe, Frédéric Hamelin, Kaitlin M. Gold, Neha Potnis et al.
Phytopathology
Plant Pathogens and Resistance
article

From Chaos to Clarity: Deriving Meaningful Biology from Big Data in Plant Pathology

Nik J. Cunniffe, Frédéric Hamelin, Kaitlin M. Gold, Neha Potnis, Karen A. Garrett, Alexandra J. Weisberg, Juan A Navas‐Cortés
article en

Abstract

This Focus Issue was inspired by the vast volumes of data now being generated from both laboratory experiments and field studies. These complex, high dimensional data sets demand new analytic approaches. We invited contributions that apply novel statistical, machine learning, or artificial intelligence methods, or that integrate multiple 'omics approaches to reveal new aspects of pathogen biology, host interactions, or emergent system-level properties. The Focus Issue contains 13 articles falling into five broad themes and drawing upon a diverse range of data types, from disease imaging to meta-barcoding data to optical sensing to genetic data to expert knowledge. Together, these papers show how integrating technology, data, and biology is already transforming plant pathology. We hope this Focus Issue inspires new collaborations, new methods, and a continued commitment to turning data into understanding and chaos into clarity. [Formula: see text] The author(s) have dedicated the work to the public domain under the Creative Commons CC0 "No Rights Reserved" license by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law, 2025.

PhytopathologyVol. 115(10)
Oregon State University (US), Cornell University (US), University of Cambridge (GB), University of Florida (US), Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR), Institut de Génétique, Environnement et Protection des Plantes (FR), Instituto de Agricultura Sostenible (ES), L'Institut Agro (FR), Université de Rennes (FR), Auburn University (US)
Openalex Percentile: Top 78%
Plant Pathogens and Resistance
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